Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g0487 ATGGGCTGTGTCAATGGCAAGTGTTGTAACCGGTACCCTACACCGTCAGAGGGTGGCTCCAGAGACTACAGAGAACTTGGCCCTTACCGTGCACAAAGGAAGCACATACTCACTCAGAGACCATTGGAGGTAGCTACTGTTCCTTCACATAACTTCACTTTGGAGTATTCTGTTCTAACCCAGAGAGGATACTACCCTGATTCACCTGAAAAGGAAAACCAAGATAGTTTCTGCATTAGGAATCAGATTCAAGGTAACCCCAGTGTCCATTTCTTTGGTGTGTATGATGGTCATGGTCAATTTGGTGGACAGTGTGCAAACTTTGTTAAGGATAGGTTAGTAGAAACATTGTCTAGTGACCCTGCATTGTTGGAGGACCCTGTTAAGGCTTACACTTCTGCATTCTTAACAACGAATTACGAACTGCATAACAGTGATGTTGATGATTCAATGAGTGGTACCACTGCAATTACAGTGCTTGTTATTGGTGATACCCTTTATGTAGCTAATGTTGGTGACTCAAGAGCAGTGCTAGCTGTTAAGGACGGGAATAGAATTATTGCTGAGGACTTGTCCTCGGATCAGACACCGTTCCGGAGAGATGAATATGAGAGAGTGAAGCTTTCTGGGGCAAGGGTGTTGAGTGTTGATCAGGTAGAAGGGCTTAAGGATCCAAATATCCAAACTTGGGGTGACGAAGAGAGTCAGGGTGGCGATCCTCCAAGGTTGTGGGTTCAAAATGGAATGTATCCTGGAACTGCTTTCACAAGGAGTGTTGGGGATAATTTGGCAGAGACTATCGGTGTCATTGCTGTTCCTGAGGTGTCAACAGTCCAGCTTACACCGAATCATCTATTCTTTGTTGTTGCAAGTGATGGGATATTTGAGTTCCTATCAAGCCAAACTGTTGTTGACATGGCAGCAAGCTATTCAGATCCCCGTGATGCATGTGCCGCCATTGCTGGAGAGTCATATAAACTATGGTTGGAACATGAGAACCGAACAGATGATATAACAATTATCATTGTTCAGATCAAAGGCCTGTCAAATTTAGGTTCATCTCAAGTTGGATCAGGTGACATCAATGCCAGTATGTTAACAAGGTCCAAGAGGGGAAACGGAATATCAGAGACATCCACTACTACTGTGTCGGAAGTTTCTCGTTCTGTGAGGAGTGGAATCTCCGATTTACAGACATGTCAGCATGCAGTCTCAATGAGAAGTCCAGCTATAGTCGCTCCCTCACCAACTGGTCAAAGACCAATATGA 1269 0.4452 MGCVNGKCCNRYPTPSEGGSRDYRELGPYRAQRKHILTQRPLEVATVPSHNFTLEYSVLTQRGYYPDSPEKENQDSFCIRNQIQGNPSVHFFGVYDGHGQFGGQCANFVKDRLVETLSSDPALLEDPVKAYTSAFLTTNYELHNSDVDDSMSGTTAITVLVIGDTLYVANVGDSRAVLAVKDGNRIIAEDLSSDQTPFRRDEYERVKLSGARVLSVDQVEGLKDPNIQTWGDEESQGGDPPRLWVQNGMYPGTAFTRSVGDNLAETIGVIAVPEVSTVQLTPNHLFFVVASDGIFEFLSSQTVVDMAASYSDPRDACAAIAGESYKLWLEHENRTDDITIIIVQIKGLSNLGSSQVGSGDINASMLTRSKRGNGISETSTTTVSEVSRSVRSGISDLQTCQHAVSMRSPAIVAPSPTGQRPI* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g0487 422 PANTHER PROTEIN PHOSPHATASE 2C AND CYCLIC NUCLEOTIDE-BINDING/KINASE DOMAIN-CONTAINING PROTEIN 23 418 - -
Amo14g0487 422 ProSitePatterns PPM-type phosphatase domain signature. 91 99 IPR000222 GO:0043169
Amo14g0487 422 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 23 418 - -
Amo14g0487 422 ProSiteProfiles PPM-type phosphatase domain profile. 55 345 IPR001932 -
Amo14g0487 422 CDD PP2Cc 71 345 IPR001932 -
Amo14g0487 422 Pfam Protein phosphatase 2C 73 320 IPR001932 -
Amo14g0487 422 Gene3D - 40 347 IPR036457 -
Amo14g0487 422 SUPERFAMILY PP2C-like 41 347 IPR036457 -
Amo14g0487 422 SMART PP2C_4 51 343 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g0487 Amo-Chr14 6773599 6777095 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g0487 1 350 PP2C-type Phosphatase Gene Family AT3G06270 74.221 0.0 532
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g0487 - - aprc:113872580 709.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g0487 14 6773599 6777095 Amo14g0487 14 6773599 6777095 ECH