Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g0450 ATGGACGATTCTTCTTCAATTTGGGATCTTACTTATCTTCTCGATTTCAACCTCGACGATTTACCCCTTGACCCTCACCAACCATCTCAACCGTTGGATTTCGATCCTCCAGCTGCTCCCGATCCACACAATATTCCTCCTCCTTCTCCTCTTCCCGCCAACGACAAGGTTCGGAAACGCGACCCGAGGCTCACGTGCTCCAACTTTCTCGCGGGCCGGGTTCCATGTGCGTGCCCCGAGATAGATGCTCAGATCGAGAACGAGGGTCTCCCCGGCAAGAAGCGCGTGCGCACCGCTTCCGCCGCGCGTGGCTCACCCCCGACGGTTTGTTGCCAGGTTCCTGGCTGCGAGGTCGATATCACGGAGCTGAAGGGGTACCACCGGAGGCATAGGGTTTGCCTACGCTGTGCTAATGCTGCCACTGTTATGCTCGACGGCGAGGCCAAGAGATACTGTCAACAGTGTGGCAAAAATTCGAAGGGAGAATTCTGGAACACGTTACTTGAAGAAGCAATTCGAGTCATGATAAGCATAAGAAACGGTAAACGTAGCTGTAGGAGAAAGTTAGAGCGCCATAACAATAGGAGGCGAAGAAAGCCAGCAGATTCAAGAGCTGAAGCTGCTCATGAACCTCTACCTGTTGCACAAAATGAGGATTCAAATAATGACGGGGAAACAGGAAAAGGTTTAGATTCTTCAAATTTGAGTTGTGAAATAAATGAAAAAGAAGTGTCACTGGATCTTGAAGATGAACCAGTTGCCAATCTTAACTCAGCTCCTGATATGCAGAATATTACAAATGACAGTGTTATGACTTTTCTTGCTTCTGGGGAAACACAAGTGAATAGTGGAAAAGATGCTTCCAACCTCTCTAATTCTCCTTCGTATTGTGACAATAAGAGTGCTTATTCATCTTTGTGCCAAACAGGTCGGATTTCTTTCAAGCTTTATGATTGGAACCCTGCAGAATTTCCTAGAAGGCTACGCCACCAAATATTCCAATGGTTGGCGAGTATGCCTGTTGAGCTTGAGGGATATATCCGCCCAGGGTGTACCATCCTGACAATTTTTATCGCCATGCCAAAGAATATGTGGATAAATTTACTGGAAGACCCTATGTACTATGTGCGCGATCTTGTTGCTCCTGGAAAGTTCCTATCTGCAAGAGGCAATGCACTAATTTATCTGAATGATATGTTCTTCCGCATTATGAAAGATGGAACTTCTGTGACAAAAGTCAAGGTAAATATGCAGGCACCAAGGCTTCACTATGTTCATCCCACATACTTTGAGGCCGGGAAACCTCTGGAGTTTGTTGCTTGCGGAAGTAACTTGATGCAGCCTAAGTTTCGGCTTCTTGTATCTTTTTCTGGAAAGTATCTGAAGTGTGAATATTGTGTTCCATCTCCACATAACTGGACTGGGAACAATATGTCATGTGCTTTTGAGAATCAGTTATACAAGATATATGTCCCTCATACAGAGGAAACTCTCTTTGGGCCTGCATTTATTGAGGTGGAGAATGAGTCTGGTTTATCAAACTTCATTCCTGTTCTCATTGGGGACAAAGAAATTTGCAGTGAGATGAGGACATTACAGCAAAGGTTAGATGAGTCTCTTCATTCTAAACAATTCCAGTCTACATCTGGTGGTTCTATCTGCAGCTTGTGTGAAGATTTTGCACATAGGCACACATCATCAGACTTGCTTGTAGATATAGCATGGTTGCTTAAGAACCCTACCTCAGAAAATTTTGAGAGAATGATGACGGCTTCACAAATTCAAAGATACTGTTACTTGTTGGACTTTCTTATATGCCATGATTCAATACTGATTTTGGAAAAAATATTACCAAAGTTGGTGATCTTTACAGAAGGCTTGAAATCAAATATTGTGATTAGTCGGACGAGTGATGTTGATGTGACACAATTACTGAATTGCATGCATCTTGCTAGAGATGTTATTAATCAGAATCATCAGAAAGGCAGAGGCATAGTTGTGCATTCTGAAACAGAAGGCTTTCGGATTGAAAAAACCTGCAGCCAAGACAGCTTGCCATCAGTTTCGAGAATAAAAAGTCAGGATGTTCTATCCAGAACGGATTCAAAGTGTGGAATAATGAGAAGCCCAACATCTAATGACAAAATTGATAGGATACCACTTTTGAAGAGGGAGATTATAATGAATATGGAAGAGTTGCCTAAACGATCCAGCCGGCGATATGTCGGTAGGGGATTCTTGAGCTCTCGACCGGCAATGTTTGTGATTGTTTCGGTTGCTGTTTGTCTTGCAGTATGTGTAGCCGTCCTTCACCGGGGGAGGGGTCCAGGGATGTTGATGTTATTACTTATTAGTGATGGAGTGGGTGGTTCATTAATGGAGGCAGGCTTAACTGGACCTGTTTCTGGTTTCTATATAAAATTCATATGGCCTTCATGTGAGTTAATTCAAACAAATACACGCATAAAACCCAAAAAAAAATCATTTGAATGCAAACATGTGAATTTTCTCTACAATTATGAATTCTCTAATCTATGGAAGAAGATTAAATATATTATAAATTTTTTTTTTTTTTTTTCTTGTTTCTTTTTCTTAGAAAGGTGTCCTTTTTCCCCTCATTTTTAA 2625 0.4225 MDDSSSIWDLTYLLDFNLDDLPLDPHQPSQPLDFDPPAAPDPHNIPPPSPLPANDKVRKRDPRLTCSNFLAGRVPCACPEIDAQIENEGLPGKKRVRTASAARGSPPTVCCQVPGCEVDITELKGYHRRHRVCLRCANAATVMLDGEAKRYCQQCGKNSKGEFWNTLLEEAIRVMISIRNGKRSCRRKLERHNNRRRRKPADSRAEAAHEPLPVAQNEDSNNDGETGKGLDSSNLSCEINEKEVSLDLEDEPVANLNSAPDMQNITNDSVMTFLASGETQVNSGKDASNLSNSPSYCDNKSAYSSLCQTGRISFKLYDWNPAEFPRRLRHQIFQWLASMPVELEGYIRPGCTILTIFIAMPKNMWINLLEDPMYYVRDLVAPGKFLSARGNALIYLNDMFFRIMKDGTSVTKVKVNMQAPRLHYVHPTYFEAGKPLEFVACGSNLMQPKFRLLVSFSGKYLKCEYCVPSPHNWTGNNMSCAFENQLYKIYVPHTEETLFGPAFIEVENESGLSNFIPVLIGDKEICSEMRTLQQRLDESLHSKQFQSTSGGSICSLCEDFAHRHTSSDLLVDIAWLLKNPTSENFERMMTASQIQRYCYLLDFLICHDSILILEKILPKLVIFTEGLKSNIVISRTSDVDVTQLLNCMHLARDVINQNHQKGRGIVVHSETEGFRIEKTCSQDSLPSVSRIKSQDVLSRTDSKCGIMRSPTSNDKIDRIPLLKREIIMNMEELPKRSSRRYVGRGFLSSRPAMFVIVSVAVCLAVCVAVLHRGRGPGMLMLLLISDGVGGSLMEAGLTGPVSGFYIKFIWPSCELIQTNTRIKPKKKSFECKHVNFLYNYEFSNLWKKIKYIINFFFFFSCFFFLERCPFSPHF* 875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g0450 874 MobiDBLite consensus disorder prediction 29 53 - -
Amo14g0450 874 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 3 773 IPR044817 GO:0003677
Amo14g0450 874 Gene3D - 102 186 IPR036893 GO:0003677|GO:0005634
Amo14g0450 874 MobiDBLite consensus disorder prediction 185 234 - -
Amo14g0450 874 ProSiteProfiles Zinc finger SBP-type profile. 108 199 IPR004333 GO:0003677
Amo14g0450 874 SUPERFAMILY SBT domain 109 202 IPR036893 GO:0003677|GO:0005634
Amo14g0450 874 MobiDBLite consensus disorder prediction 24 58 - -
Amo14g0450 874 Pfam SBP domain 111 199 IPR004333 GO:0003677
Amo14g0450 874 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 7 3 773 - -
Amo14g0450 874 MobiDBLite consensus disorder prediction 215 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g0450 Amo-Chr14 6397769 6403639 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g0450 4 771 SBP-box Gene Family AT5G18830 45.732 0.0 627
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Amo14g0450 SBP 3.8e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g0450 - - gmx:100776034 1046.19