Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g0429 ATGGCTGTGCATTCGGAATATCGTCTTATTGCTTACTCAGAAGAGATTGTAGATGGGCAGCCTATTTTTGTTTCTTCAAACTGTCTTCCTATCAAGGCTGTGAAATATGAACCAGCTGGCCATGCCTTCCATTCTGCCGCACTCAAACTTCTCGGTGTTAGGGAGAGTAACGAAGATCCTGATTCTAAAAAGGTTGTTGACGATAAGGAACCGACATCTCTCCCGTCCGATTCCTACAGCAGCAAGAGCAAAAAGAAAGCTGGAGACAAGCAGCAAGATCACTATGCATTGTTGGGCCTGAGTCATCTAAGATATCTTGCCTCGGAGGATCAAATTCGTAAGAGCTACCGTGAAACTGCCTTGAGGTTTCATCCCGACAAACAGGCTGCTCTGCTTCTTGCTGAGGAAACCGAAACCGCGAAGCAGGCAAAGAAAGATGAAATAGAAAGCCACTTTAAGGCCATCCAGGAGGCGTATGAGGTCTTGATTGATCCCGTGAAAAGAAGAATTTATGATTCGACAGATGAGTTTGATGATGAGATTCCAACTGATTGTGCTCCGCAGGACTTCTTCAAAGTGTTTGGTCCTGCATTTATGAGGAATGGTCGGTGGTCAGTCAGTCAACCAATTCCATCACTAGGCGATGATAATACTCCACTAAAAGAAGTTGATGATTTCTACAATTTTTGGTACTCCTTTAAAAGTTGGAGGGAGTTTCCCCATGCTGATGAGTTTGATCTTGAGCAAGCTGAATCTCGTGACCATAAGAGATGGATGGAAAGGCAGAATGCAAAACTTTCAGAGAAAGCTAGGAAGGAAGAGTATGCTCGGATACGTTCCCTTGTTGATAATGCTTATAAGAGAGACCCAAGAATATTGAGAAGAAAAGAAGAGGAGAAAGCTGAGAAGCAAAGGAAAAAAGAGGCTAAAATCATGGCAAAGAGGATGCAGGAAGAAGAAGCAGCCAGAATTGCAGAAGAGGAGAAGCGGCGAAAGGAGGAGGAAGAGAAACGAGCTGCAGAAGTTGCTTCACAGCAGAAGAAGGTGAAGGAGAAAGAGAAAAAGCTCTTGCGGAAGGAGAGAACACGGCTGAGGAATCTCTCTGGACCTATATTGTCACAACAGTTACTTGGTATTTCTGACGACGATGTTGAGAAGCTTTGCATGTCATTTGATATTGAGAAGCTAAGGGGTTTGTGTGAGAAAATGGAGGGAAAACAGGTAGTGGACCAGGCAGAAGTTCTAAGAGATGCACTGAGTTGCAAGAAAGATGAGACTGATAAGAAAGAAGAGAGAAGTATCCAACAAAATGGTGCCGTGAAGGTTAATGGCAGTGTTTCTTTAAGCAACATTGAGAAGAAGGAGAAACCTTGGAGTAAAGAAGAGATTGATCTATTGAGGAAAGGAATGCAGAAATATCCCAAAGGAACTTCAAGGAGATGGGAGGTTATTTCCGAATACATTGGTACTGGAAGATCAGTGGACGAAATAATGAAGGCAACAAAAACAGTTCTCCTCCAGAAGCCAGATTCAGCCAAAGCTTTTGATGCTTTCCTTGAGAAAAGGAAACCTGCAGCACAATCAATTGCATCTCCACTGTCAACCAGAGAAGAATTAGAAGGGGTATCAATTCCTGCAAAGCCTGAAAATAGTGCTGCTGCAACAACAAATAACTCAGAAGACTCTAATAGCAACCAGACATCTGGTTCTGCTCCTTCTCCTGCTGCTGCAAATGGAGTTTCCTCTAGTTCAGAACAAGACGTGTGGTCTGCAGTACAGGAACGAGCACTGGTTCAAGCTCTAAAAGCCTTCCCAAAGGAAACTAACCAGCGATGGGAACGAGTCGCAACAGCTGTCCCTGGAAAGACTGTGAATCAGTGCAAGAAAAAATTCGCATTGATGAAGGAGAGTTTCAGGAGCAAGAAAAGTGCGGTTTAA 1938 0.4365 MAVHSEYRLIAYSEEIVDGQPIFVSSNCLPIKAVKYEPAGHAFHSAALKLLGVRESNEDPDSKKVVDDKEPTSLPSDSYSSKSKKKAGDKQQDHYALLGLSHLRYLASEDQIRKSYRETALRFHPDKQAALLLAEETETAKQAKKDEIESHFKAIQEAYEVLIDPVKRRIYDSTDEFDDEIPTDCAPQDFFKVFGPAFMRNGRWSVSQPIPSLGDDNTPLKEVDDFYNFWYSFKSWREFPHADEFDLEQAESRDHKRWMERQNAKLSEKARKEEYARIRSLVDNAYKRDPRILRRKEEEKAEKQRKKEAKIMAKRMQEEEAARIAEEEKRRKEEEEKRAAEVASQQKKVKEKEKKLLRKERTRLRNLSGPILSQQLLGISDDDVEKLCMSFDIEKLRGLCEKMEGKQVVDQAEVLRDALSCKKDETDKKEERSIQQNGAVKVNGSVSLSNIEKKEKPWSKEEIDLLRKGMQKYPKGTSRRWEVISEYIGTGRSVDEIMKATKTVLLQKPDSAKAFDAFLEKRKPAAQSIASPLSTREELEGVSIPAKPENSAAATTNNSEDSNSNQTSGSAPSPAAANGVSSSSEQDVWSAVQERALVQALKAFPKETNQRWERVATAVPGKTVNQCKKKFALMKESFRSKKSAV* 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g0429 645 CDD SANT 457 499 IPR001005 -
Amo14g0429 645 ProSiteProfiles Myb-like domain profile. 581 631 IPR001005 -
Amo14g0429 645 Coils Coil 293 367 - -
Amo14g0429 645 CDD DnaJ 93 164 IPR001623 -
Amo14g0429 645 MobiDBLite consensus disorder prediction 56 90 - -
Amo14g0429 645 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 2 1 643 IPR044634 GO:0006450|GO:0030544|GO:0043022|GO:0051083
Amo14g0429 645 SMART dnaj_3 92 167 IPR001623 -
Amo14g0429 645 Pfam Myb-like DNA-binding domain 588 631 IPR001005 -
Amo14g0429 645 ProSitePatterns Nt-dnaJ domain signature. 152 171 IPR018253 -
Amo14g0429 645 Pfam DnaJ domain 93 172 IPR001623 -
Amo14g0429 645 ProSiteProfiles Myb-like domain profile. 450 505 IPR001005 -
Amo14g0429 645 ProSiteProfiles SANT domain profile. 584 639 IPR017884 -
Amo14g0429 645 SUPERFAMILY Chaperone J-domain 52 171 IPR036869 -
Amo14g0429 645 SMART sant 454 507 IPR001005 -
Amo14g0429 645 SMART sant 585 637 IPR001005 -
Amo14g0429 645 Gene3D - 450 508 - -
Amo14g0429 645 SUPERFAMILY Homeodomain-like 450 499 IPR009057 -
Amo14g0429 645 Gene3D - 579 645 - -
Amo14g0429 645 MobiDBLite consensus disorder prediction 549 588 - -
Amo14g0429 645 CDD SANT 589 635 IPR001005 -
Amo14g0429 645 Gene3D DnaJ domain 77 185 IPR036869 -
Amo14g0429 645 MobiDBLite consensus disorder prediction 56 71 - -
Amo14g0429 645 MobiDBLite consensus disorder prediction 523 588 - -
Amo14g0429 645 SUPERFAMILY Homeodomain-like 587 641 IPR009057 -
Amo14g0429 645 PRINTS DnaJ domain signature 48 66 IPR001623 -
Amo14g0429 645 PRINTS DnaJ domain signature 116 131 IPR001623 -
Amo14g0429 645 PRINTS DnaJ domain signature 147 167 IPR001623 -
Amo14g0429 645 MobiDBLite consensus disorder prediction 322 354 - -
Amo14g0429 645 PANTHER DNAJ DOMAIN, MYB-LIKE DNA-BINDING DOMAIN PROTEIN-RELATED 1 643 - -
Amo14g0429 645 ProSiteProfiles dnaJ domain profile. 93 175 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g0429 Amo-Chr14 6158050 6161080 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g0429 80 293 C2H2 Transcription Factor Family AT1G74250 28.740 1.02e-18 88.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Amo14g0429 DnaJ 1.5e-17 CL0392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g0429 K09522 - gmx:100806665 959.518