Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g0427 ATGGAGACTCAGTTCAATCACAACCTCTTCGAGCGGCGCCCCTTCCTCAAATCCAAGGCTCCCGCCGTTAAATGGGTCAAACAATGGGTTCCTCAAGACGTTGTAGCTACTGGCGGGAAGTGCATGCTCCTAAGATGGGTAACAGAGGATTCCTTAAAGGCCTTGAAAGAAAAGGAAAAAGAGCCTTCTGCACCTGAGCCTGAACCAGAGCCAACTACTGAAGTACTTTTCCTATGCAGCTATGAGGGCTGTGGAAAGACATTCATAGATGCTGGTGCTTTGAGGAAGCATTCTCACATCCATGGAGAGAGGCAATTTGTTTGCCACTATGAGGGATGTGGAAAGAAATTTCTGGACAGCTCAAAGTTGAAAAGACATTTTCTCATTCATACAGGGGAAAGAGATTTTGTGTGTCCTCATGAAGGTTGTGGTAAGGCCTTCTCCTTGGATTTCAACCTGCGGTCCCACATGAAAACACACTCACAAGAGAACTATCATATCTGCCCATACCCAGATTGTGGAAAGAGATATGCTCACGAATACAAACTAAAGAATCATATTGCGTCTCAGCATGATAAGAATGCATCAGTGGATTTGACAAAGTATACTCCACCATCGGAAAAGCCAGCGAAACCAACTAAACCTGCTAGTGGAACTTACGGTTCTGCATCATCTGATCGCCCTTATGCATGTCCTTATGAAGGGTGTGAAAAAGCATACATCCATGAATACAAGCTTAAACTCCATTTGAAGAGGGAGCACCCAGGCCACGATGAAAATGCTGTGCGTGCACAAGCTAATGCTGACAATGAAATGGATGAAGCGAGTGAACAAGACGCCTATGGTCGAAAACGATCAAATGGTAAAAGTCAGAAGCAAAGTAGACCGAAACCAAGCTTGAAGTTGCCTCCTGCCAAAATCGCCCAACGAAAAGGGTCAGCTCCTACTCCAGCCGCATCAAATGCGATTAAAAAGTCATGGCCAGTGAAAGAAGAAGTCTACGATGAAGATAGTGAAGAAACAGAAGAGGATCGTGACAACGTTGAAGATGGTTGGAGATATGCTGCAAACAACGATGATGACGATGAGGAAACAGAATATGAAGACTGA 1110 0.4477 METQFNHNLFERRPFLKSKAPAVKWVKQWVPQDVVATGGKCMLLRWVTEDSLKALKEKEKEPSAPEPEPEPTTEVLFLCSYEGCGKTFIDAGALRKHSHIHGERQFVCHYEGCGKKFLDSSKLKRHFLIHTGERDFVCPHEGCGKAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASQHDKNASVDLTKYTPPSEKPAKPTKPASGTYGSASSDRPYACPYEGCEKAYIHEYKLKLHLKREHPGHDENAVRAQANADNEMDEASEQDAYGRKRSNGKSQKQSRPKPSLKLPPAKIAQRKGSAPTPAASNAIKKSWPVKEEVYDEDSEETEEDRDNVEDGWRYAANNDDDDEETEYED* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g0427 369 ProSitePatterns Zinc finger C2H2 type domain signature. 231 254 IPR013087 -
Amo14g0427 369 Gene3D Classic Zinc Finger 162 191 - -
Amo14g0427 369 PANTHER BNAA03G13270D PROTEIN 3 368 - -
Amo14g0427 369 SMART c2h2final6 106 130 IPR013087 -
Amo14g0427 369 SMART c2h2final6 136 160 IPR013087 -
Amo14g0427 369 SMART c2h2final6 229 254 IPR013087 -
Amo14g0427 369 SMART c2h2final6 166 191 IPR013087 -
Amo14g0427 369 SMART c2h2final6 77 101 IPR013087 -
Amo14g0427 369 MobiDBLite consensus disorder prediction 266 369 - -
Amo14g0427 369 Pfam Zinc finger, C2H2 type 166 191 IPR013087 -
Amo14g0427 369 Pfam Zinc finger, C2H2 type 136 160 IPR013087 -
Amo14g0427 369 ProSiteProfiles Zinc finger C2H2 type domain profile. 106 135 IPR013087 -
Amo14g0427 369 ProSitePatterns Zinc finger C2H2 type domain signature. 168 191 IPR013087 -
Amo14g0427 369 ProSitePatterns Zinc finger C2H2 type domain signature. 108 130 IPR013087 -
Amo14g0427 369 SUPERFAMILY beta-beta-alpha zinc fingers 224 252 IPR036236 -
Amo14g0427 369 ProSitePatterns Zinc finger C2H2 type domain signature. 79 101 IPR013087 -
Amo14g0427 369 ProSiteProfiles Zinc finger C2H2 type domain profile. 77 106 IPR013087 -
Amo14g0427 369 ProSiteProfiles Zinc finger C2H2 type domain profile. 229 259 IPR013087 -
Amo14g0427 369 ProSiteProfiles Zinc finger C2H2 type domain profile. 136 165 IPR013087 -
Amo14g0427 369 MobiDBLite consensus disorder prediction 192 226 - -
Amo14g0427 369 ProSiteProfiles Zinc finger C2H2 type domain profile. 166 196 IPR013087 -
Amo14g0427 369 SUPERFAMILY beta-beta-alpha zinc fingers 117 170 IPR036236 -
Amo14g0427 369 PANTHER TRANSCRIPTIONAL REPRESSOR PROTEIN YY 3 368 - -
Amo14g0427 369 Gene3D Classic Zinc Finger 103 133 - -
Amo14g0427 369 Gene3D Classic Zinc Finger 134 161 - -
Amo14g0427 369 Gene3D Classic Zinc Finger 77 102 - -
Amo14g0427 369 SUPERFAMILY beta-beta-alpha zinc fingers 80 130 IPR036236 -
Amo14g0427 369 Gene3D Classic Zinc Finger 203 274 - -
Amo14g0427 369 ProSitePatterns Zinc finger C2H2 type domain signature. 138 160 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g0427 Amo-Chr14 6133618 6136443 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g0427 8 355 C2H2 Transcription Factor Family AT4G06634 65.217 1.02e-146 418
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Amo14g0427 zf-C2H2 0.0061 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g0427 - - qsu:111997563 618.231