Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g0425 ATGGAAGTATCAGATTTGCAAAACAAGAAGAAGAAGCAGCAGAGCGGCAACAACAACAATAACAGCAGCCTTGTGGTCCCCTTTGATGGAGCCACCACCGCCACCGGAAGGCCCTTCATCATGGGGGGGTCCATGTCTTCTTCAACTTCGTCGTCTTCTTCTTCATCCAATTCAACTTCTTCTTCCACCACCATCGACGCCAACCTCGCCATCGCCACCAGATCTGACGACAACCAGCTCCAGACTGCACCCAAGAGGTCCACCAAGGACAGGCATACAAAGGTCGACGGTCGAGGCCGCAGAATCCGAATGCCCGCCACATGCGCCGCTAGGGTTTTCCAGTTGACCAGAGAATTGGGACACAAGTCAGACGGAGAGACCATCGAGTGGCTTCTCCAGCAGGCTGAGCCTGCTATCATCGCCGCCACCGGCACCGGCACCATCCCCGCTAATTTCTCCACCCTCAACGTCTCTCTAAGAAGCAGCGGCTCCACGCTCTCCGCTCCGCCGTCCAAGTCCGCACCTCACACTTTCCACGCTGCAGCGTTGGCACTCGCTCACCACCATCCTTCTTACGAGGAAGCGTTTCACCAGCACACGGCGTTGCTAGGGTTTCACCCTCACCACGCGCAGCACCAGCACCTTATGACTGCTGACCAAATCGCAGAAGCGCTTCCCGGCGGCGCCGCCGACTCCAGCGAGAACTATATGAGGAAACGCTTCAGAGAAGACCTGTTCAAAGATGAGAGCAATCATCCGACGGAGTCGCAGAACAATGAAAGTGGTGGTGCAGGTGCAGCTGCTGCCGATGGATCTTCGCCAAAGCCGTTCAAAACCAACCTACAAATGCAGCTGCAACAACAGCAACCTCAACCAGAAGGAGGAGGAGCGGGTGGTGGTGGTGGTGGTTCTTCTGGACATGGACTTCTTCGCCAATCCAATTTGGTACCTGCCACTGCCATGTGGGCGGTAGCGCCCGCACCCGCCACCGCCGGTGCACCAGGCAGCACAATCTGGATGCTTCCAGTGACTGCTGGAGGTGCAGGTGGTGTGGCCACCGGTGCTGCAGCCTCGGAGGCGCAGATGTGGCCGTTTGCTCATCAGGGTGGCGGTGGCGGCGGCGGCGGCGGCGGTGGTAACAACACGTTGCAAGGTCCACTACACTTGATGCCGAGGTTCAACCTTTCCCCCAGTGGCGGCGTTGAATTCCAGCAAGAGGGACGCGGTGGTCTTCAGTTGGGTTCGATGGTAATGCCGGCGGCGCAGCAACAGCAGCAGCCGCCGTCTCAGCATCTTGGATTGACGATGTCAGAATCCAACTTGGGAATGCTGGCTGCTTTGAATGCTTACACAAGAGCTGGTTTGAACATGAACATGAATATGAACATCAATTCTTCTTCTTCTCATCATCATCATCATCATCATCATCAGCCTCCTCCTCCTCCTCAGGCTGCAGACAGCGGGGAAGATGGTCCTAACAGCTCCCAATGA 1491 0.5667 MEVSDLQNKKKKQQSGNNNNNSSLVVPFDGATTATGRPFIMGGSMSSSTSSSSSSSNSTSSSTTIDANLAIATRSDDNQLQTAPKRSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGTGTIPANFSTLNVSLRSSGSTLSAPPSKSAPHTFHAAALALAHHHPSYEEAFHQHTALLGFHPHHAQHQHLMTADQIAEALPGGAADSSENYMRKRFREDLFKDESNHPTESQNNESGGAGAAAADGSSPKPFKTNLQMQLQQQQPQPEGGGAGGGGGGSSGHGLLRQSNLVPATAMWAVAPAPATAGAPGSTIWMLPVTAGGAGGVATGAAASEAQMWPFAHQGGGGGGGGGGGNNTLQGPLHLMPRFNLSPSGGVEFQQEGRGGLQLGSMVMPAAQQQQQPPSQHLGLTMSESNLGMLAALNAYTRAGLNMNMNMNINSSSSHHHHHHHHQPPPPPQAADSGEDGPNSSQ* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g0425 496 MobiDBLite consensus disorder prediction 461 496 - -
Amo14g0425 496 MobiDBLite consensus disorder prediction 83 101 - -
Amo14g0425 496 MobiDBLite consensus disorder prediction 1 101 - -
Amo14g0425 496 MobiDBLite consensus disorder prediction 249 310 - -
Amo14g0425 496 Pfam TCP family transcription factor 87 204 IPR017887 -
Amo14g0425 496 ProSiteProfiles TCP domain profile. 88 142 IPR017887 -
Amo14g0425 496 PANTHER TRANSCRIPTION FACTOR TCP8 14 496 - -
Amo14g0425 496 MobiDBLite consensus disorder prediction 10 29 - -
Amo14g0425 496 MobiDBLite consensus disorder prediction 39 82 - -
Amo14g0425 496 MobiDBLite consensus disorder prediction 275 293 - -
Amo14g0425 496 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 14 496 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g0425 Amo-Chr14 6108657 6110891 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g0425 85 365 TCP Transcription Factor Family AT1G35560 48.084 3.36e-60 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Amo14g0425 TCP 3.1e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g0425 - - adu:107482753 758.444