Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g0413 ATGTCCACCTTGGCCTTCACAACCCTCGTTGTTTCGGTTCTGTTTTCTCTCCTCTCTTGCTCTGCTTCTTCTTCAACCCTGCTCAGTGATTTCCATGCACTTGTTTCACTCAAAGAAGGATTTCAATTCCCAAACCCAGCTCTCAATAACTGGAACACTTCCAATCCGGTCTCCGTTTGTTCATGGACCGGAATTCAATGCCACCGGGGGAGAGTGGTTACCGTCGACTTAACAGATTTCAACCTCTTCGGCTCTGTTTCTCCTTCAGTTTCTCAACTGGACAGCCTCATCCACCTATCCCTTTCCGGCAACAACTTCACCGGCGCCATTGACGTCAGCAACATGAGCAGCCTCAAGTTCCTCAACATCTCGAGCAACCAGTTCAGCGGCCACCTCCATTGGAACTACTCCACCCTTCATAGCCTCCAAGTTCTGGACGCCTACGACAACAACTTCACCTCCTTGCTTCCCGTGGGGCTTCTGAGTCTCAAGAAGCTCACGTACTTGGATCTTGGCGGCAACTACTTGTACGGAGAAATCCCGCCTAGCTACGGCGGCCTGACGGGGCTAGAGTACCTTTCTCTGGCGGGAAACGACCTTCGGGGAAGAATCCCGGCGGAGTTAGGGAACCTAACGAAGCTGAGGGAGATATACTTAGGCTACTACAATTCCTTTGTAGGCGGCATTCCGGTGCAGTTTGGAAAACTGACGAGTTTGGTGCATATGGATCTCTCAAGCTGTGACTTGGACGGTTCAATTCCAAGAGAGTTGGGGAAGTTGAACCAACTTGACACTCTTTACCTCCACATTAACCAGCTCTCCGGTTCAATCCCGACGGAGCTGTCAAACTTAACGGCTCTCGTCAATCTTGACCTCTCCAGCAATGCACTCAGCGGGGAGATTCCGGCGGAGTTCGCCAACCTCAGCCGACTCAAGCTCTTCAACCTCTTCTTGAACAGGCTTCACGGCTCCATACCGGACTACATTGCGGAGTTCCCGGAGCTGGAAACGCTTGGCCTCTGGATGAACAACTTCACCGGCGAGATACCGTACGGCCTCGGCTTGAACGGGAAGCTACAGGTGCTTGACTTGTCGTCCAACAAACTCACCGGTGTGATTCCTCCTCACCTTTGTTCCTCTAAGCAGCTAAGAATCCTGATTCTCCTCGACAATTTTCTCTTTGGACCCATCCCCGACGGTTTCGGAACGTGTTACAGTCTGACCAGAGTGAGGTTAGGAGAGAATTACCTCAACGGAACCATCCCTAACGGATTTCTTTACCTTCCTAAGCTAAACTTAGCCGAGTTACAGAACAACTACCTCACCGGAACCTTGACGGAGAATTCCAATAGCTCCTCTCAGCCTCTTAATTTAGCCCAGCTTGATTTGTCAAACAATGCATTGTCCGGTCCACTACCCAATTCGCTTTCCAACTTCTCCTCTGTTCAGATCCTTTTGCTCAGCGGCAACCAATTCTCCGGTCCAATTCCGCCTTCCATTGCAGGACTCCGACAGGTACTCAAGCTTGATCTAAGCAGGAATTGGTTGTCCGGGGAAATTCCGCCGGAGATTGGGCAGTGCGACCACCTTACCTACCTTGACATGAGCCAGAACAATCTCTCTGGCTCTATTCCTCCTCTCATAGCCAATATCCGCATTTTGAATTACCTCAACTTGTCAAGAAACCATTTGAACCAAAGCATCCCCAAATCAATAGGCACCATGAAGAGTCTCACCATTGCAGACTTCTCGTTCAATGAATTGTCCGGTAAGTTACCGGAGTCAGGGCAGTTTTCGTTCTTCAATGCTTCGTCTTTCGCAGGGAACCCTCAACTGTGCGGGTCTTTGGTCAACAACCCCTGCAACTTGAGCAGAATGACATCCCAGCAGGGAAAGCGCTCTCCGGATTTCAAATTAATATTTGCGCTGGGGCTGTTGATTTGCTCCCTGGTGTTTGCAGTTGCAGCCATCATAAAGGCCAAGTCGTTCAAGAAGAATGGACCCGGTTCGTGGAAGATGACGGCATTCCAGAAGCTGGAATTCAGGGTGTCGGACATTCTAGAATGCGTGAAAGACGGGAATGTGATCGGAAGAGGAGGTGCCGGGATTGTTTACCACGGGAAGATGCCGAACGGAGTAGAAGTGGCAGTTAAGAAGCTACTGGGAATCGGTGCGAGCAGCCATGATCACGGGTTCCGTGCAGAGATTCAAACACTGGGGAACATAAGGCATAGAAACATAGTGAGGCTACTGGCGTTCTGCTCCAACAAGGAGACGAACCTGCTTGTGTACGAGTACATGAGGAATGGAAGCTTAGGAGAGGCGTTGCATGGGAAGAAGGGTGCGTTCTTGAATTGGAACTTGAGGTACAAAATAGCCATTGATTCTGCTAAGGGACTCTGTTACCTTCACCATGATTGTTCACCCTTGATTGTCCACCGTGACGTCAAGTCCAACAACATTTTATTGAATTCCAATTTCGAAGCCCACGTGGCGGATTTCGGTCTCGCTAAGTTCTTGGTGGACGGCGGCGCCTCCGAGTACATGTCTTCTATTGCCGGCTCCTACGGCTACATTGCACCCGAATATGCATACACACTGAGGGTGGACGAAAAGAGTGACGTGTACAGTTTTGGAGTAGTGGTGTTAGAGCTTCTAACCGGACGGAAACCGGTGGGGGCAGAGTTCGGTGAAGGAGTGGATCTTGTGCAATGGTGCAAGAAAGCAACGAATGGACGGAAAGAAGAGGTTATGAACATAATTGATCAGAGGCTGAGCGTGGTCCCCAAAGAAGAAGCCATACACCTTTTCTTCATTTCCATGCTCTGCTTAGAAGAAAACAGTGTGGAGAGACCAACCATGAGGGAAGTCGTTCAAATGCTTTCTGAGTTCCCTCGCTCTTCCTTCTCTCCTCACTTACACCAATCTTCTTCCTCTCAATTACCTCCCAAACACAAACCTCCTAATTCTAATAATAAACATCTTTTGCTTTAA 2994 0.4957 MSTLAFTTLVVSVLFSLLSCSASSSTLLSDFHALVSLKEGFQFPNPALNNWNTSNPVSVCSWTGIQCHRGRVVTVDLTDFNLFGSVSPSVSQLDSLIHLSLSGNNFTGAIDVSNMSSLKFLNISSNQFSGHLHWNYSTLHSLQVLDAYDNNFTSLLPVGLLSLKKLTYLDLGGNYLYGEIPPSYGGLTGLEYLSLAGNDLRGRIPAELGNLTKLREIYLGYYNSFVGGIPVQFGKLTSLVHMDLSSCDLDGSIPRELGKLNQLDTLYLHINQLSGSIPTELSNLTALVNLDLSSNALSGEIPAEFANLSRLKLFNLFLNRLHGSIPDYIAEFPELETLGLWMNNFTGEIPYGLGLNGKLQVLDLSSNKLTGVIPPHLCSSKQLRILILLDNFLFGPIPDGFGTCYSLTRVRLGENYLNGTIPNGFLYLPKLNLAELQNNYLTGTLTENSNSSSQPLNLAQLDLSNNALSGPLPNSLSNFSSVQILLLSGNQFSGPIPPSIAGLRQVLKLDLSRNWLSGEIPPEIGQCDHLTYLDMSQNNLSGSIPPLIANIRILNYLNLSRNHLNQSIPKSIGTMKSLTIADFSFNELSGKLPESGQFSFFNASSFAGNPQLCGSLVNNPCNLSRMTSQQGKRSPDFKLIFALGLLICSLVFAVAAIIKAKSFKKNGPGSWKMTAFQKLEFRVSDILECVKDGNVIGRGGAGIVYHGKMPNGVEVAVKKLLGIGASSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLVYEYMRNGSLGEALHGKKGAFLNWNLRYKIAIDSAKGLCYLHHDCSPLIVHRDVKSNNILLNSNFEAHVADFGLAKFLVDGGASEYMSSIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVVLELLTGRKPVGAEFGEGVDLVQWCKKATNGRKEEVMNIIDQRLSVVPKEEAIHLFFISMLCLEENSVERPTMREVVQMLSEFPRSSFSPHLHQSSSSQLPPKHKPPNSNNKHLLL* 998
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g0413 997 SMART LRR_typ_2 357 380 IPR003591 -
Amo14g0413 997 SMART LRR_typ_2 236 260 IPR003591 -
Amo14g0413 997 SMART LRR_typ_2 187 211 IPR003591 -
Amo14g0413 997 SMART LRR_typ_2 551 575 IPR003591 -
Amo14g0413 997 SMART LRR_typ_2 503 527 IPR003591 -
Amo14g0413 997 SMART LRR_typ_2 139 162 IPR003591 -
Amo14g0413 997 SMART LRR_typ_2 163 186 IPR003591 -
Amo14g0413 997 SMART LRR_typ_2 284 307 IPR003591 -
Amo14g0413 997 Gene3D Phosphorylase Kinase; domain 1 655 766 - -
Amo14g0413 997 Gene3D Transferase(Phosphotransferase) domain 1 767 978 - -
Amo14g0413 997 Gene3D Ribonuclease Inhibitor 135 223 IPR032675 -
Amo14g0413 997 Gene3D Ribonuclease Inhibitor 224 320 IPR032675 -
Amo14g0413 997 SMART serkin_6 690 938 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g0413 997 Pfam Leucine Rich repeat 527 542 IPR001611 GO:0005515
Amo14g0413 997 PANTHER UNNAMED PRODUCT 4 970 - -
Amo14g0413 997 Pfam Leucine Rich Repeat 358 378 IPR001611 GO:0005515
Amo14g0413 997 Pfam Protein kinase domain 692 959 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g0413 997 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE BAM3 4 970 - -
Amo14g0413 997 Gene3D Ribonuclease Inhibitor 321 629 IPR032675 -
Amo14g0413 997 SUPERFAMILY RNI-like 75 395 - -
Amo14g0413 997 Pfam Leucine rich repeat N-terminal domain 29 67 IPR013210 -
Amo14g0413 997 SUPERFAMILY L domain-like 357 614 - -
Amo14g0413 997 ProSitePatterns Serine/Threonine protein kinases active-site signature. 811 823 IPR008271 GO:0004672|GO:0006468
Amo14g0413 997 SUPERFAMILY Protein kinase-like (PK-like) 683 961 IPR011009 -
Amo14g0413 997 ProSiteProfiles Protein kinase domain profile. 690 965 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g0413 997 Gene3D Ribonuclease Inhibitor 29 134 IPR032675 -
Amo14g0413 997 MobiDBLite consensus disorder prediction 967 987 - -
Amo14g0413 997 MobiDBLite consensus disorder prediction 967 997 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g0413 Amo-Chr14 6010224 6014168 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g0413 18 989 Receptor kinase-like Gene Family AT5G65700 56.539 0.0 1079
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Amo14g0413 Pkinase 1.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g0413 - - cit:102612034 1504.19