Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g0409 ATGGCGGGAGAAGGAGGCGATGTTAGCGTTGCCAACGGCGCTGATGAAACAGCAAACCCGGAATCCGCAGCCTCCTCTCCAAAGAGCAAGGTCAAGTTCATGTGCAGCCATGGTGGCAAGGTTCTTCCCCGTCCCTCCGATGGCCTCCTCAAGTACGTCGGCGGCGAGACTCGCGTCGTTTCTGTCCCTAGGAACGTCACTTTCCACGAGTTGATGAAGAAGCTGCATGGAATGATCGAAGGAGGAGAAAGCATGGTGCTAAAGTATCAGCTGGTGCCGGAAGATCTGGACACACTGGTATCGGTGAGGAACGACGAGGATCTAAAGCATATGATTGACGAGCATGACCGTCACGAAGTTGGAGGAGCTCCCATGCTGCGGACATTCATGTGCCCGTCGAAGCCGCTTTTGGTGGTGGACAAAGATAACCAAGGAACATCAGGGACTGAGCCCTACCCCTTGGAGCAGCGCTACATTGATGCCATTAACGGCTTCCAGCGCATAAGCCCAAGGTCAAGGCCTAGTCCAATTAGGGCTGCATTCAACGCCCCCTCTGCCTGTTCATCCCCCAAATCCAACTCCCCAGACGGTCACACCACGGATCTGGTCCACGAATCGCCGCCCTTCCACGGCCACATTCTCGGTCTCGGTCTAGGCCGCCGTAGCACCATGCATAGAGTGCACAGCTCTCCCAGCATTTCTAGCCTAAGCAACATTCACAGCCTTGCCGTTCAACAGCATGAACACCATAACCATTATCACAATCATTCCCCGAGCCACCAGAGTCAGAACCAGGGCCAGAGCCAGGGTCAGGGCCAGAACCAAGGCCACCATCCTCCTGCTCATCTGCCTGCTTCTTATCAAAGAACCGCGACACAAGATCAATTAGTTGGGATGGGAAGGCCGCCGCCGCTTTTGGCGCTGAGGAGGTCGGATATGGGTAGCAGGAGTGCAAATAGTAGTAGTAGTACTTTCAACTATTATTATCCGGCTACTAATAATAATAATTGCAGACCCCCAAAAGGGTACGGATACTACGATGAATCTCCAGCATACGGTGGTGGCATGGGTGAAAGAGTTGGTAGTGTGCCTCAGAGTCCTAGAAACTCTATATGGGAATAA 1122 0.533 MAGEGGDVSVANGADETANPESAASSPKSKVKFMCSHGGKVLPRPSDGLLKYVGGETRVVSVPRNVTFHELMKKLHGMIEGGESMVLKYQLVPEDLDTLVSVRNDEDLKHMIDEHDRHEVGGAPMLRTFMCPSKPLLVVDKDNQGTSGTEPYPLEQRYIDAINGFQRISPRSRPSPIRAAFNAPSACSSPKSNSPDGHTTDLVHESPPFHGHILGLGLGRRSTMHRVHSSPSISSLSNIHSLAVQQHEHHNHYHNHSPSHQSQNQGQSQGQGQNQGHHPPAHLPASYQRTATQDQLVGMGRPPPLLALRRSDMGSRSANSSSSTFNYYYPATNNNNCRPPKGYGYYDESPAYGGGMGERVGSVPQSPRNSIWE* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g0409 373 MobiDBLite consensus disorder prediction 1 30 - -
Amo14g0409 373 PANTHER OS05G0427100 PROTEIN-RELATED 11 331 - -
Amo14g0409 373 MobiDBLite consensus disorder prediction 246 284 - -
Amo14g0409 373 SMART PB1_new 45 133 IPR000270 GO:0005515
Amo14g0409 373 MobiDBLite consensus disorder prediction 185 200 - -
Amo14g0409 373 MobiDBLite consensus disorder prediction 167 208 - -
Amo14g0409 373 PANTHER OS05G0427100 PROTEIN 11 331 - -
Amo14g0409 373 Gene3D - 51 131 - -
Amo14g0409 373 Pfam PB1 domain 50 118 IPR000270 GO:0005515
Amo14g0409 373 MobiDBLite consensus disorder prediction 313 327 - -
Amo14g0409 373 CDD PB1_UP2 34 129 - -
Amo14g0409 373 SUPERFAMILY CAD & PB1 domains 47 136 - -
Amo14g0409 373 MobiDBLite consensus disorder prediction 296 327 - -
Amo14g0409 373 MobiDBLite consensus disorder prediction 257 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g0409 Amo-Chr14 5983498 5985124 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g0409 30 165 MAP Kinase Kinase Kinase AT5G57610 46.479 5.31e-29 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g0409 - - aip:107638505 624.394