Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g0407 ATGAAAGTGCACTGCTCCGATTCTCGTCACAGAAGCTTTCAGGCAGAAAATAGTGGCATTTTGTGGTACTCTTGGAAAGAAGGAAGTCACTCACTCATGGCGTCGGCAAGCCTTGGAAATGGTGGTGTTGGCAGTTCCAGGTCTGTTAATGGCTTCAGGGGTTCTTCTAGTTCAGTTGATTGGCTCGGGAGAGAGATGCTTGAGATGAGATTGAGGGACAAAGCTGACCATGAAGAAGACAGAGATAGTGAGCCGGACATCATTGATGGTGTGGGTGCTGAAACTGGACATGTGATTAGAACCAGCATCGGTGGCCGAAATGGTCAATCTAGGCAGAATATTAGCTATATTGCGGAACACGTTGTCGGCACAGGCTCTTTCGGTGTTGTTTTTCAAGCAAAATGTAGAGAAACTGGAGAGATTGTAGCCATCAAGAAGGTTCTCCAGGATAAGCGCTACAAGAATAGAGAACTACAGATAATGCAGATGCTGGACCATCCAAATATTGTGGCCCTTAGGCATTGTTTCTATTCAACGACTGACAAAGAAGAAGTTTACTTGAATCTTGTACTTGAATATGTTCCTGAAACTGTGAATCGTATTGCAAGGAACTATAGCCGAATGAATCAGCGAATGCCTTTAGTATATGTAAAGCTTTATACCTATCAGATTTGCAGGGCCCTTGCTTATATACATAATTGCATTGGTATATGTCACCGTGACATCAAACCTCAGAACTTGCTTGTGAACCCACACACTCATCAGCTGAAACTATGTGATTTTGGAAGTGCTAAAGTGTTGGTGAAAGGAGAACCTAATGTTTCTTACATCTGTTCAAGATACTATCGTGCTCCAGAACTTATCTTTGGTGCCACTGAATATACAACCGCGATAGATATATGGTCAACTGGTTGTGTAATGGCTGAATTACTTCTTGGACAGCCTTTGTTTCCTGGAGAGAGTGGAGTCGATCAACTTGTTGAAATCATCAAGGTTTTGGGAACTCCAACAAGGGAGGAGATAAAATGCATGAACCCAAATTATACTGAATTTAAGTTTCCACAGATAAAACCTCATCCATGGCACAAGGTCTTTCAAAAACGTTTACCCCCAGAAGCAGTAGACCTTGTCTGTAGATTTTTTCAGTACTCTCCCAATCTGCGATGCACTGCCTTGGAAGCTTGCATTCATCCCTTCTTCGATGAGTTGAGGGACCCTAACACCCGGCTTCCTAATGGTCGCCCACTGCCACCTCTGTTTAATTTTAAGCCTCAGGAACTTTCAGGGATACCACCTGATGTCATCAGTCGGCTTATTCCAGAGCATGCTCGTAAGCAGAACTTGTTCATGGCATTGCATAACTAG 1365 0.4337 MKVHCSDSRHRSFQAENSGILWYSWKEGSHSLMASASLGNGGVGSSRSVNGFRGSSSSVDWLGREMLEMRLRDKADHEEDRDSEPDIIDGVGAETGHVIRTSIGGRNGQSRQNISYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALRHCFYSTTDKEEVYLNLVLEYVPETVNRIARNYSRMNQRMPLVYVKLYTYQICRALAYIHNCIGICHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNVSYICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACIHPFFDELRDPNTRLPNGRPLPPLFNFKPQELSGIPPDVISRLIPEHARKQNLFMALHN* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g0407 454 PANTHER SHAGGY-RELATED PROTEIN KINASE DELTA-RELATED 33 451 - -
Amo14g0407 454 ProSiteProfiles Protein kinase domain profile. 116 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g0407 454 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 33 451 - -
Amo14g0407 454 SUPERFAMILY Protein kinase-like (PK-like) 115 428 IPR011009 -
Amo14g0407 454 Gene3D Transferase(Phosphotransferase) domain 1 196 444 - -
Amo14g0407 454 SMART serkin_6 116 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g0407 454 CDD STKc_GSK3 111 403 IPR039192 -
Amo14g0407 454 ProSitePatterns Serine/Threonine protein kinases active-site signature. 237 249 IPR008271 GO:0004672|GO:0006468
Amo14g0407 454 ProSitePatterns Protein kinases ATP-binding region signature. 122 146 IPR017441 GO:0005524
Amo14g0407 454 Gene3D Phosphorylase Kinase; domain 1 101 195 - -
Amo14g0407 454 Pfam Protein kinase domain 118 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g0407 Amo-Chr14 5972632 5977953 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g0407 122 408 Core Cell Cycle Gene Families AT1G76540 35.452 2.75e-57 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Amo14g0407 Pkinase 3.4e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g0407 K03083 - jre:108983720 819.305