Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g0386 ATGTTAAAGGCAAAGGTATTCAATGGCGCGAACGTGTTCATGTCACGGAACCTGGTTCCGCCCGAGGTATTCGACACTCTTCATGATGTGCTCAAAGACAACGGTGCACAAGTGCACCTCTGCTGCGACCCTTCCCGCAATGGCCCCAATGATTACCATGTCATTTCTTGCAGTAAACATGAGAAGTTTGAGGATCTTAAAGCCAAAGGCTGCAAATTGCTTGGACCCAGATGTGTTCTTTCATGTGCTAAAGAACTTAAGCCTTTGCCTAAAGTTGGATTTACGTGTTGCCTTGCCATGGATGGTGTCAAAATACTTGCATCTGGCTTCGATACCAATGAGAAGCTTAAGATAGAAGAGATTGTGACTGAAATGGGTGGTCTTCTACATACTAAAGCATCACTGGATTTGAACTTTGTCATTGTGAAAAATGTTTTGGCTGCAAAATACAAGTGGGCTTTGAATATACTGAAGAAACCAATAGTTACTTATGAATGGTTAAAGCAATGCTCAGAGGAGCATCGTGTTGTTCCTCAGGAGTCATACAAGGTCCTTCCTTTCTCCGGGTTGACGATTTGTGTTACTGGGATTCCAGCAGATAAACGCAAAGAGATTGAGAAGCTTACTTTACAAAATGGTGGAAAGTACTCTGCAGAATTGACAAAGAAGTGCACTCATTTGATTTCTGATATATCCTTCCAGTGGTCCTCTACTTTTAATGAGGGTGTTTCTTTTCTTTTTTTTTTTTCAGATATCAAAATAGGCACAATCTACTTGCTTTCAGTGTCTGCTGCATATCTTTCTTAA 807 0.4102 MLKAKVFNGANVFMSRNLVPPEVFDTLHDVLKDNGAQVHLCCDPSRNGPNDYHVISCSKHEKFEDLKAKGCKLLGPRCVLSCAKELKPLPKVGFTCCLAMDGVKILASGFDTNEKLKIEEIVTEMGGLLHTKASLDLNFVIVKNVLAAKYKWALNILKKPIVTYEWLKQCSEEHRVVPQESYKVLPFSGLTICVTGIPADKRKEIEKLTLQNGGKYSAELTKKCTHLISDISFQWSSTFNEGVSFLFFFSDIKIGTIYLLSVSAAYLS* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g0386 268 Gene3D BRCT domain 36 94 IPR036420 -
Amo14g0386 268 PANTHER DNA REPLICATION REGULATOR DPB11-RELATED 7 230 - -
Amo14g0386 268 SUPERFAMILY BRCT domain 59 183 IPR036420 -
Amo14g0386 268 Gene3D BRCT domain 96 184 IPR036420 -
Amo14g0386 268 CDD BRCT 103 170 - -
Amo14g0386 268 CDD BRCT_TopBP1_rpt2_like 186 230 - -
Amo14g0386 268 Pfam BRCA1 C Terminus (BRCT) domain 100 170 IPR001357 -
Amo14g0386 268 SMART BRCT_7 97 174 IPR001357 -
Amo14g0386 268 SMART BRCT_7 184 266 IPR001357 -
Amo14g0386 268 SMART BRCT_7 4 86 IPR001357 -
Amo14g0386 268 Pfam twin BRCT domain 190 230 IPR001357 -
Amo14g0386 268 Gene3D BRCT domain 185 238 IPR036420 -
Amo14g0386 268 SUPERFAMILY BRCT domain 186 238 IPR036420 -
Amo14g0386 268 ProSiteProfiles BRCT domain profile. 100 184 IPR001357 -
Amo14g0386 268 ProSiteProfiles BRCT domain profile. 182 230 IPR001357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g0386 Amo-Chr14 5688750 5695048 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g0386 1 232 Core DNA Replication Machinery Family AT1G77320 69.828 6.93e-112 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g0386 K10728 - gmx:100804966 426.017