Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g0370 ATGCATTATCACATACATACAAACTCTCAACCAGAAATCAAAATGCGCTGCTGTGCCCTTCCTAGTTCTTATCACCATCACCGATTAACATCGCCACCCAAAACAATTTTCCAATTCCCATCCAATACAACAACCCGCTACTATTCGCCCAAACCCGACATTATTACCAATCCGACCCGACCCGCGTTGCGACTGAGCCTCAGAGCAAATGCTTCTACGTCGTCGTTCGATGCGTTAGCGGTGGCGACGGAGGAAGCGAATGCGAGCTTGTACGAGGTTCTTGGCGTGCCCGAGTGGGTGGCGGTGGCGGAATTGAAGCAGGCGTACAAGAAGCTTGCGAGGAAGTTCCATCCGGACGTGTCGCCACCGGGTCGGGTTGAGGAGTACACAAGGAGGTTTATTCGTGTGCAGCAGGCCTACGAGACTCTCTCTGATCCCGCAATGAGAGAGCTCTATGATAGAGATATGGCTATGGCCGTCAAGTTCCCCTTCTCCTCTCGCTTCGGTCACCGCCGCGCCACCAGCTTCCACCGTCAACATCCCCACCCTCACTGCCATACGGTTATGGAACAAAGAAATGAATGGAAAACTCAGTGGGAGTCACAACTCTCTGGGCTGAAGAGAAGAAGCAAAATAAAAAATAGTGGAGTCAATGATTCTTGGGCAGCAAAAATGCGAAATATTAATAATAACGTTTTTGTCGAGGAAGAAACTATTTTTACTCCTCCTGTTTAA 735 0.4939 MHYHIHTNSQPEIKMRCCALPSSYHHHRLTSPPKTIFQFPSNTTTRYYSPKPDIITNPTRPALRLSLRANASTSSFDALAVATEEANASLYEVLGVPEWVAVAELKQAYKKLARKFHPDVSPPGRVEEYTRRFIRVQQAYETLSDPAMRELYDRDMAMAVKFPFSSRFGHRRATSFHRQHPHPHCHTVMEQRNEWKTQWESQLSGLKRRSKIKNSGVNDSWAAKMRNINNNVFVEEETIFTPPV* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g0370 244 ProSiteProfiles dnaJ domain profile. 89 156 IPR001623 -
Amo14g0370 244 SUPERFAMILY Chaperone J-domain 87 164 IPR036869 -
Amo14g0370 244 SMART dnaj_3 88 148 IPR001623 -
Amo14g0370 244 ProSitePatterns Nt-dnaJ domain signature. 133 152 IPR018253 -
Amo14g0370 244 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 32 228 - -
Amo14g0370 244 Pfam DnaJ domain 90 153 IPR001623 -
Amo14g0370 244 PRINTS DnaJ domain signature 91 109 IPR001623 -
Amo14g0370 244 PRINTS DnaJ domain signature 109 124 IPR001623 -
Amo14g0370 244 PRINTS DnaJ domain signature 128 148 IPR001623 -
Amo14g0370 244 CDD DnaJ 91 145 IPR001623 -
Amo14g0370 244 Gene3D DnaJ domain 74 166 IPR036869 -
Amo14g0370 244 PANTHER CHAPERONE PROTEIN DNAJ 20, CHLOROPLASTIC 32 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g0370 Amo-Chr14 5370814 5373653 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g0370 91 153 C2H2 Transcription Factor Family AT1G74250 40.909 3.23e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g0370 - - ahf:112795692 508.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g0370 14 5370814 5373653 Amo14g0370 14 5370814 5373653 ECH