Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g0369 ATGGCATTGTGTAACAAGCTTGGAAATTTCTTGAGACAGAGTGCTTCCGGAAGCGGATTAGCACCTGCTCCATCGATGCTCAATTATATTCGCTGCATGTCCTCAAACAGGCTTTTCATTGGGGGCCTTTCATACGGAGTTGATGACCAGTCTCTTCGGGATGCATTCTCCGGCTTTGGGGATGTGGTTGATGCAAGGGTGGTCACTGATAGAGACACCGGAAGATCAAGAGGTTTTGGATTTGTCAACTTCTCAAGCGACGAGTCTGCAAGCTCAGCACTCAGTGGAATGGATGGGCAGGATCTAAACGGCCGAGTGATCAGGGTGAGCTATGCTAATGATAGGCCTACTGGACCTCGGGGTGGTGGCGGTGGTTTCGGTGGTGGTGGTGGTGGTGGTTATGGGGGAGGTGGTTACCGTAGAGGTGGAGGTGGTGGTTATGGTGATCCAGACTTCTAG 459 0.5163 MALCNKLGNFLRQSASGSGLAPAPSMLNYIRCMSSNRLFIGGLSYGVDDQSLRDAFSGFGDVVDARVVTDRDTGRSRGFGFVNFSSDESASSALSGMDGQDLNGRVIRVSYANDRPTGPRGGGGGFGGGGGGGYGGGGYRRGGGGGYGDPDF* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g0369 152 Gene3D - 31 149 IPR012677 -
Amo14g0369 152 SMART rrm1_1 37 110 IPR000504 GO:0003723
Amo14g0369 152 SUPERFAMILY RNA-binding domain, RBD 31 146 IPR035979 GO:0003676
Amo14g0369 152 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN 3 MITOCHONDRIAL 1 148 - -
Amo14g0369 152 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 36 114 IPR000504 GO:0003723
Amo14g0369 152 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 1 148 - -
Amo14g0369 152 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 38 108 IPR000504 GO:0003723
Amo14g0369 152 MobiDBLite consensus disorder prediction 112 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g0369 Amo-Chr14 5328141 5330541 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g0369 35 126 Eukaryotic Initiation Factors Gene Family AT1G49760 39.130 2.17e-14 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g0369 - - gmx:100499841 179.874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g0369 14 5328141 5330541 Amo14g0369 14 5328141 5330541 ECH