Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g0349 ATGGAATCCACAAGCTCGAATGATGAGGTTGTTCCAAACATAGGAATGGCATTCTCCTTTGTGAAAGATTATGAAACTTTTCATACCAATTATGCAAAAAGGGTTGGTTTTTCATGGAATATAAGAATTACTAAGTGGGATCAAAATAGACAAATTACATACCAAATCTTGGTATGTTCTAGAGCTGGTTATCGAAGATCAAAAATTGATCCACTAAAGAAGACAAATCCAACTTTCGAGCAAAATTGTAAAGCTGGGATTATTGTAAAAAGGGATAAGAAGATAGAATATGTGTTAATCTTTGTGAATATCCAGCACAACCATACTATTACAACTACTGCTGGTGGCTATGATAAATTAACTTTTACTCAAAAAGATCTTCAAAATCATGTAGCAAGAAGTGTCAGAGTCATAGAAGAAGAGGGGGATGCGCAATCATTAATGCATTTGCATGATAATAATTGGTTAGCAGGTTTGTACAAAGAACGTGACAGGTGGGTTTTTATTTTTCTTAGCAACAGTTTTTGGGCAGGCATGAGTAGCACTCAAAGGAGTGAAACTCAACAAGAATATGAATTGGATGCTGCCAGCTTCAATACCATTATCCCTTGTGCTACTGCCTCTGCTATTGAAAAACAGTTTCAAAAGGAATATACTCATGCAAAGTTTAATGAGCTTCAAAAGGAGTTCAGAGCAAAGGCTAATTGCTTTTCAACAAAAGAGCATGAAGAGGGATATGTTGTTACTTACAAGGTTATAGAAGAGCTTGAGAATGGTGATAAGATGTTTGATTCAAATGGAATCTTATGCCGGCATAGTCTTTCAGTCCTTGGTCTTGAAAGAGTGAAGAAATTGCTAAATAAATACATTCTTGATCGGTGGAAGAAAACTTTAAAGCGCAAGCATAGTAACATCAAGTGTAGCCATGATCAATCCAAGTCGTTTAGAGCCCGTAAAAAAACGTTATGA 969 0.3571 MESTSSNDEVVPNIGMAFSFVKDYETFHTNYAKRVGFSWNIRITKWDQNRQITYQILVCSRAGYRRSKIDPLKKTNPTFEQNCKAGIIVKRDKKIEYVLIFVNIQHNHTITTTAGGYDKLTFTQKDLQNHVARSVRVIEEEGDAQSLMHLHDNNWLAGLYKERDRWVFIFLSNSFWAGMSSTQRSETQQEYELDAASFNTIIPCATASAIEKQFQKEYTHAKFNELQKEFRAKANCFSTKEHEEGYVVTYKVIEELENGDKMFDSNGILCRHSLSVLGLERVKKLLNKYILDRWKKTLKRKHSNIKCSHDQSKSFRARKKTL* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g0349 322 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 149 310 IPR031052 GO:0006355
Amo14g0349 322 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 4 122 IPR031052 GO:0006355
Amo14g0349 322 Pfam FAR1 DNA-binding domain 27 111 IPR004330 -
Amo14g0349 322 PANTHER OS03G0843700 PROTEIN 149 310 - -
Amo14g0349 322 PANTHER OS03G0843700 PROTEIN 4 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g0349 Amo-Chr14 5008552 5011525 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo14g0349 FAR1 2.1e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g0349 - - aip:107627133 252.677