Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g0317 ATGATTACATGTCAAATGGTAGCCTTGAAGACCATCTCTTCTCTTCCATGGACAACTAAAATGCAAAAATCACTTACTTGGTCTAAAAAAAAGAGCATAATCTTGGATGTGGCAAATGGGTTAGTCTATTTGCACTTTGGAATTAAACCTGCAATCTACCACAGAGATATCAAAACCACCAATATAGTGCTTGATGCAGGTATGAATGCAAGAGTTGCGGATTTCGGGTTAGCTAAACAAAACTTTGAAAGCAGATCTTTGATAAATACAAGAGTTGCTGGAACTCATGGGTACCTGGCACCAGAATATGCACTTTATGGCCAATTATCCGAAAAGAGTGATGTCTATAATTTTGGTGTGGTTATATTGGAAATATTGTGTGGAAGAAAAGTTCTTAATTTATCTTCATCTGGAGCACCTGCATTCTTTATCTCTGATTGGGTTTGGTCATTGCTGAAATATGTAGCTGATTCAAGGCCAACAATTTTGGATGCTTTGAAGATGTTAGAAGGGGATATTGAGATTCCACCAATTCCATAG 540 0.3722 MITCQMVALKTISSLPWTTKMQKSLTWSKKKSIILDVANGLVYLHFGIKPAIYHRDIKTTNIVLDAGMNARVADFGLAKQNFESRSLINTRVAGTHGYLAPEYALYGQLSEKSDVYNFGVVILEILCGRKVLNLSSSGAPAFFISDWVWSLLKYVADSRPTILDALKMLEGDIEIPPIP* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g0317 179 ProSitePatterns Serine/Threonine protein kinases active-site signature. 52 64 IPR008271 GO:0004672|GO:0006468
Amo14g0317 179 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 22 153 - -
Amo14g0317 179 PANTHER OS01G0253100 PROTEIN 22 153 IPR045271 GO:0004714|GO:0006468
Amo14g0317 179 Gene3D Transferase(Phosphotransferase) domain 1 14 174 - -
Amo14g0317 179 ProSiteProfiles Protein kinase domain profile. 1 179 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g0317 179 Pfam Protein kinase domain 21 133 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g0317 179 SUPERFAMILY Protein kinase-like (PK-like) 23 170 IPR011009 -
Amo14g0317 179 SMART serkin_6 3 169 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g0317 Amo-Chr14 4332304 4332956 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g0317 18 179 Receptor kinase-like Gene Family AT1G11050 59.901 3.43e-74 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Amo14g0317 Pkinase 2.5e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g0317 - - lja:Lj0g3v0288509.1 251.136