Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g0285 ATGGATAGCGAAGATCAAAGAAGAACTCAAACTCAAGGAAATGAGAATCATGGAGTTCATGTATGTAACAAATGTGGATGGCCTTTTCCAAATCCACACCCCAGTGCCAAACATAGGCGTGCTCACAAGAAAAACTGTGGAACCATTGAAGGTTACAAGCTTTTGGTCTCAGAGGGTCAAACCCATTTGAACCTTTCAGATGATGAACACTTCTCTGATAATGATCACAAAACACAAGCTGCAGAAGAGAGTCCATCAATTTCCAAATCAAGAAATGATATTGTAGCACAAACTCCTAAAATTTTGCAAAGTGAGAGGAATGATGATTGTAACCTGCTGGAGTTACAAGATTTGAAAACTGATGATTCTTTTGCTCTCGCAAGTGACTCAAATACCTGCAGATCTGAAGCCATGTCTGATGTGTTGCTGGACAATAAGATCTATGTTGATGGAACGAAGGGGACGACTTTGAAAGAAAAGGATGAAATCAAACCAGATAGAGACATGTTTGAGATTGTGGAATCTTCCGACAGCACCATAGGTAGAACATTTGAGGGAGTGTCTGGAGCAGTTACTGAAGTGGTTAGCTTGAAATCTCAAGTTACTGATGGAGCTTTTATTCTGAAGGAAAATAATGGCTCTGGCTTCCCTTCTGTTATGCCCAAAGATCTTTTTCTTGAAGCAGAATCTGCTCAGAGCATGAATGATTCCATAGATGGCATACGGGTAGAGTCAGAACACATGACAGAGCTTGCTACTTCTGGTGACATCATGATATCACGGGAAAGGGAAGAAGTAAATGTTGAAATGCTTACATTTCCTTCATGTGATGATAGACCTGATGTGGCACACCCTCATATTGAGTATGAATGTCATGAACCAGTGGTCTCTCAAAATTCTGCAAGTCTACATTTGTCTAAAGCATTGGAACAAGGGCATGATGGCTTGAAGGATTCTGTTACCGGGGAAAATGATTTTCTTATCAACCAAGGCCAACTGAGCAAAAAGGGAGATCTTCTCTCGCAAGATATGCATTCATTGAATAGTAACATGAAAAAGCAGGTGAACTGTGAGCTTGTGGCTGCAGAAATGCATGCTGAAGAGTGCATTGAGGTTTTCAATGGCGAAAGTAACAGAAGATTACATGAAACTGGAGCCTTTATGAATGATATGAAAACTGAGAAGAATGAGAATCATGTGGTTCACTTTTCTGAAGAACAGGTATCCAATGATGCTCATAAAAATTCACAACAGATTGATGTACCCAAAGGTAGTTTAATGGCTGCATCAGATGAGAACGCCTGTGATGCATCCTTTGTATCTGCAACTAGTCAAACAACTGCTGTAATTATCAGAGACAATACAACTCATCATGAGGGAAACATAACCAGCATAGCTGTAGATGACGAATGCAGAAGGGCTAATATTGAAAATGATACTGGAATATGCATGAATACTCTTCAATCTAGTAATGTGCTTTCGGAGATCAATTCATCAAGTATATGTAATGAATATGGTGTTGAAATGGGTAAATTTGAGCAATCTGATATAGTAGATGCACAACATGCTGAAAGTGGTATTGTGAAAGATGCTACATTACCAGATATTTTTGAATCTACAATTCTTTCAGAGGTTGTAATAGATGGGCCTAAAGGGACACCTAAAGATATTGAATGCTCAAATAGAAGTCCATTATCTTGTACTCACGAAGAAATCAAAGAAGAGGAAATCAATAGCATAGACAGATCAAATGAATACAGTAATATAGTTGCTAGTACTTCTGCTGCTCCTCATCAAACACAAGACGAGGAACTATTACATAAGGCTACAGAAGGCATTGATTTAATTGAAGATTCCAATAGAACTGGTAGAGACCATTCTTTAAATATTGAGCCTTCTTATCAGTGTGTTTCTCCTGTCGAAGATACTCAAGTTGGACAGCATGGGACGAAAGTTCCTGGAGTTGTTGCTGTCCCTATTCAAGATCAAAGAGATCTCCCTGTGCAATCTGATGTACAAGCTACTAATGAAGCGGAAGCTATAGCATCAACTGATTTGTCGATGTCAACAGAGACAGAAAAATCCAACTTGAAGTACCCAGAGGCATCTGAGGAACAGCAGTATGAAAAATCCGAAATGTTTGAACCACCTTCTTTCATGACATTGGTCGAACCTGGACTCATGCTTGGCCCAAAATCTGCACCCGAAGTCGAGACAGATCCGAACAAGCAGAAACCGGATTCTAACTCTTCACAGGCTGCTTGGTTTCCCACTTTAACTCACATTGCCAATGAGTCTGAAGGGAGAAAGAGGAATGAAGAAATAATAGCCAAGGTAACAAGAAAGCAGAACACACCTCTCAAGAGTCTTTTGGTTGAGGCTGCTCATAACAGCAAAAAGTCAAAGTCGCCCATATCAGAAAAAGATTCCGTGAATCAGAAACGTGTTAGAGTCACAGAAGATAATGGTTCTGGATTGACTACTGTTAACTCCATTCTGGGTTGTGAATCTCCCGCAATGCAGATTATGAACCGAGAGAGTACGGAAGAATGGAACTCCCCGGCTGACATAACAAGAAAAAAGAAGAAAGACAAGAGCAGATCACACTGGATACAATTGTTGTGTTGTTCATCTGTCGAAACTCGGTGA 2649 0.3998 MDSEDQRRTQTQGNENHGVHVCNKCGWPFPNPHPSAKHRRAHKKNCGTIEGYKLLVSEGQTHLNLSDDEHFSDNDHKTQAAEESPSISKSRNDIVAQTPKILQSERNDDCNLLELQDLKTDDSFALASDSNTCRSEAMSDVLLDNKIYVDGTKGTTLKEKDEIKPDRDMFEIVESSDSTIGRTFEGVSGAVTEVVSLKSQVTDGAFILKENNGSGFPSVMPKDLFLEAESAQSMNDSIDGIRVESEHMTELATSGDIMISREREEVNVEMLTFPSCDDRPDVAHPHIEYECHEPVVSQNSASLHLSKALEQGHDGLKDSVTGENDFLINQGQLSKKGDLLSQDMHSLNSNMKKQVNCELVAAEMHAEECIEVFNGESNRRLHETGAFMNDMKTEKNENHVVHFSEEQVSNDAHKNSQQIDVPKGSLMAASDENACDASFVSATSQTTAVIIRDNTTHHEGNITSIAVDDECRRANIENDTGICMNTLQSSNVLSEINSSSICNEYGVEMGKFEQSDIVDAQHAESGIVKDATLPDIFESTILSEVVIDGPKGTPKDIECSNRSPLSCTHEEIKEEEINSIDRSNEYSNIVASTSAAPHQTQDEELLHKATEGIDLIEDSNRTGRDHSLNIEPSYQCVSPVEDTQVGQHGTKVPGVVAVPIQDQRDLPVQSDVQATNEAEAIASTDLSMSTETEKSNLKYPEASEEQQYEKSEMFEPPSFMTLVEPGLMLGPKSAPEVETDPNKQKPDSNSSQAAWFPTLTHIANESEGRKRNEEIIAKVTRKQNTPLKSLLVEAAHNSKKSKSPISEKDSVNQKRVRVTEDNGSGLTTVNSILGCESPAMQIMNRESTEEWNSPADITRKKKKDKSRSHWIQLLCCSSVETR* 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g0285 882 PANTHER PENTATRICOPEPTIDE REPEAT (PPR) SUPERFAMILY PROTEIN 1 91 - -
Amo14g0285 882 MobiDBLite consensus disorder prediction 680 708 - -
Amo14g0285 882 MobiDBLite consensus disorder prediction 65 82 - -
Amo14g0285 882 MobiDBLite consensus disorder prediction 680 696 - -
Amo14g0285 882 MobiDBLite consensus disorder prediction 800 814 - -
Amo14g0285 882 PANTHER PENTATRICOPEPTIDE REPEAT (PPR) SUPERFAMILY PROTEIN 1 91 - -
Amo14g0285 882 MobiDBLite consensus disorder prediction 728 753 - -
Amo14g0285 882 ProSitePatterns Zinc finger C2H2 type domain signature. 22 42 IPR013087 -
Amo14g0285 882 MobiDBLite consensus disorder prediction 795 814 - -
Amo14g0285 882 PANTHER PENTATRICOPEPTIDE REPEAT (PPR) SUPERFAMILY PROTEIN 83 879 - -
Amo14g0285 882 PANTHER PENTATRICOPEPTIDE REPEAT (PPR) SUPERFAMILY PROTEIN 83 879 - -
Amo14g0285 882 MobiDBLite consensus disorder prediction 65 93 - -
Amo14g0285 882 MobiDBLite consensus disorder prediction 845 866 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g0285 Amo-Chr14 3894740 3899029 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Amo14g0285 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g0285 - - aip:107638253 1756.11