Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g0281 ATGAGTGTAGCGTACTCTTGTCCCCCATACTCATCTCCCTTCCTTCCATTTCAATTCCTTCCAACTTCCAAATTACAAACATTTTCTCTCTCCCAAATCCGAATGGCCACCCCCAAATTAGAATCCATAACCCTACTACCATTTCTCTCTCCTCTCTTCTTCTTCTTCTTCTTCACACTCTCTCTCTTCTCCACCACCGCCATTGGCGACGATGCCGCCGTCATGTCCAACCTCCGCAAGTCACTCACCGGAGCCCCTTCCGACTGGGCCACCACCTCGTTCTGCAAGTGGTCCGGCATCACCTGCGACACCTCCAACCGCGTAACCTCCATCAATCTCCCCAAGAGCTCCATCTCGGGAACCCTCCCTTCCGATCTCAACACCCTCACGCAGCTAACCACTCTCTCCCTCTCCTCAAACGCGCTCTCCGGCGCGTTGCCCTCACTCGCTAACCTCACCATGCTCCAAACCGTACTACTAGACCAAAACAACTTCACCTCAATCACCAAAGCCGCCTTCTCGGGACTCACCAGCCTCCAGGAGCTAAGCATGACCACCAATGTCAACCTCCAGCCCTGGACGATTCCCACCGAGTTGACTCAGTCTACCGAACTCGTCACCCTCGATCTCGGCACCACCAACCTTTTCGGCACCTTGCCGGACTTCTTCGACTCGTTTCCTGGCCTTCAGAACCTACGCCTCTCCTACAACAAACTCACCGGTCAGCTGCCCCGGTCACTCGCCGGATCTTCCGTACAGAATCTCTGGCTCAACAACCAGGACGACAGCGCTGGGTTTACCGGCACCGTCGATGTACTCGCGTCAATGACGCACTTGAATCAGGTCTGGCTTCAGAAGAATCAGTTTACCGGTCCCATTCCGGATTTGTCAAACTGCACCGATTTGTTCGATTTGCAGCTTCGCGATAACCAGTTAACCGGCGTTGTACCCGTTGCGCTGACCACAATGTCGAGTTTGAGGAACGTTTCTTTGGACAATAACAGACTCCAGGGTCCGACTCCGGCGTTCGGGAAAGATGTGACGGTCACGCTTACTGGGCTCAACAGATTTTGCGCGAAAGCTGGAGAGTCTTGTGATGATAGGGTGAACACCCTTCTTGCCGTTGCGGCCGGGTTTGACTACCCGTACCGGTTGGCGGACTCTTGGGATGGCAACAATCCTTGTAATGATTGGACCTCTGTTGTGTGCGTTGGGGAGAAGATTGTAACCTTGAATTTCAAGAATCTTGATTTGAACGGGACGATCTCGCCGGCTTTGGCGAATTTAACGGATTTGAGGAACTTGTATCTGAATGACAATAATTTGACAGGCTCAATACCGGAGAGTTTGACGAGTTTGGCTCAGCTCGAGGTTCTGGATGTTTCTAATAACAATTTGACAGGGAAGATTCCGAGTTTCCCTTCTAAGGTGAAGTTCAGCCACGGTGGCAATGCTTTGCTTGGGGTTTCTGGTGGAGGTGGAGGAAGTGGGAATGGCTCATCTTCAAATTCTGGTGATGCACCAAGTGGAAGTCCTTCTAAGGCATCGAGTGGTACTTCGCTTTCTCCTGGTTGGATTGTAGGTATAGCCATTATTGCCGTGTTTTTCGTTGCAGTTGTTTTGTTTGTGTTTTGCAAATGTTATGCCAAGAACAGGCACAAGAAATTTGGAAGGGTAAATAACCCTGAAACAGGGAAAGGAGAGGTTAAGATTGATATGGTGGGTGCTTCCAGTTCCAATGGATTTGTGGGAGCAGGGGGAGCAACAAGTGAGTTGCAAAGCCAGGGTAGCGAGCAAAACGAACAGCTCCCTGTTTTTGAAGGTGGGAATGTCACAATTTCGATCCAAGTTCTTAGGCAAGTTACAAATAATTTCAGTGAGGATAACATTTTGGGTAGGGGAGGGTTTGGTGTTGTGTACAAAGGGGAATTGCATGATGGGACTAAGATTGCGGTCAAGAGGATGGAATCGGTTGCAATGGGAACCAAAGGAATGAATGAGTTTCAAGCAGAGATTGCAGTTCTAACTAAAGTTAGGCATAGGCATTTGGTTGCTCTTTTAGGATATTGCATGAATGGCAATGAAAGACTTCTTGTGTATGAGTATATGCCTCAAGGAACACTAACACAGCATCTGTTCGATTGGCATGAGAATGGATGCGCTCCTTTGACATGGAAACAAAGGGTGGCAATAGCCCTAGATGTAGCAAGGGGAGTGGAATACTTGCACAGTTTAGCTCAGCAAAGCTTCATTCATAGAGACTTGAAACCCTCGAACATTCTGTTGGGTGATGACATGAGAGCTAAGGTTGCTGATTTTGGTTTGGTTAAAAATGCACCTGATGGAAAATATTCAGTTGAGACACGGTTAGCTGGAACGTTTGGATATCTTGCACCCGAATATGCAGCTACTGGGAGAGTGACAACAAAAGTCGACGTCTACGCATTTGGGGTAGTTTTGATGGAACTTATTACAGGCAGAAGGGCCTTGGATGATACCGTGCCTGATGATAGGTCACACTTGGTTTCATGGTTCCGCAGGGTACAAATTAACAAGGAGAACATCCCAAAGGCAATTGATCAAACCCTTGATCCTGACGAGGAAACCATGGAGAGCATTTATAAGGTGGCCGAGCTTGCAGGCCATTGCACTGCGCGCGAACCATACCAAAGGCCTGATATGGGGCATGCGGTGAATGTGTTGGTCCCCCTTGTAGAGCAATGGAAGCCTACAAACCATGAAGAAGAAGAAGGTTATGGCATTGATCTCCACATGAGCCTTCCTCAAGCTCTCAGAAGGTGGCAAGCCAATGAAGGTACTTCCACCATGTTCAATGACATGTCCTTCTCCTCACAAACGCAATCGAGCATTCCGGCAAAACCTTCTGGGTTTGCTGACTCCTTTGATTCAATGGATTGCCGGTAA 2925 0.4882 MSVAYSCPPYSSPFLPFQFLPTSKLQTFSLSQIRMATPKLESITLLPFLSPLFFFFFFTLSLFSTTAIGDDAAVMSNLRKSLTGAPSDWATTSFCKWSGITCDTSNRVTSINLPKSSISGTLPSDLNTLTQLTTLSLSSNALSGALPSLANLTMLQTVLLDQNNFTSITKAAFSGLTSLQELSMTTNVNLQPWTIPTELTQSTELVTLDLGTTNLFGTLPDFFDSFPGLQNLRLSYNKLTGQLPRSLAGSSVQNLWLNNQDDSAGFTGTVDVLASMTHLNQVWLQKNQFTGPIPDLSNCTDLFDLQLRDNQLTGVVPVALTTMSSLRNVSLDNNRLQGPTPAFGKDVTVTLTGLNRFCAKAGESCDDRVNTLLAVAAGFDYPYRLADSWDGNNPCNDWTSVVCVGEKIVTLNFKNLDLNGTISPALANLTDLRNLYLNDNNLTGSIPESLTSLAQLEVLDVSNNNLTGKIPSFPSKVKFSHGGNALLGVSGGGGGSGNGSSSNSGDAPSGSPSKASSGTSLSPGWIVGIAIIAVFFVAVVLFVFCKCYAKNRHKKFGRVNNPETGKGEVKIDMVGASSSNGFVGAGGATSELQSQGSEQNEQLPVFEGGNVTISIQVLRQVTNNFSEDNILGRGGFGVVYKGELHDGTKIAVKRMESVAMGTKGMNEFQAEIAVLTKVRHRHLVALLGYCMNGNERLLVYEYMPQGTLTQHLFDWHENGCAPLTWKQRVAIALDVARGVEYLHSLAQQSFIHRDLKPSNILLGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAATGRVTTKVDVYAFGVVLMELITGRRALDDTVPDDRSHLVSWFRRVQINKENIPKAIDQTLDPDEETMESIYKVAELAGHCTAREPYQRPDMGHAVNVLVPLVEQWKPTNHEEEEGYGIDLHMSLPQALRRWQANEGTSTMFNDMSFSSQTQSSIPAKPSGFADSFDSMDCR* 975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g0281 974 Pfam Protein tyrosine and serine/threonine kinase 628 899 IPR001245 GO:0004672|GO:0006468
Amo14g0281 974 PANTHER RECEPTOR PROTEIN KINASE TMK1-RELATED 53 974 - -
Amo14g0281 974 MobiDBLite consensus disorder prediction 945 974 - -
Amo14g0281 974 ProSitePatterns Protein kinases ATP-binding region signature. 631 653 IPR017441 GO:0005524
Amo14g0281 974 Gene3D Transferase(Phosphotransferase) domain 1 703 924 - -
Amo14g0281 974 MobiDBLite consensus disorder prediction 945 961 - -
Amo14g0281 974 Gene3D Ribonuclease Inhibitor 70 363 IPR032675 -
Amo14g0281 974 CDD STKc_IRAK 631 904 - -
Amo14g0281 974 Pfam Leucine rich repeat N-terminal domain 70 103 IPR013210 -
Amo14g0281 974 Pfam Leucine rich repeat N-terminal domain 367 403 IPR013210 -
Amo14g0281 974 SMART LRR_typ_2 226 249 IPR003591 -
Amo14g0281 974 SMART LRR_typ_2 323 346 IPR003591 -
Amo14g0281 974 SMART LRR_typ_2 129 151 IPR003591 -
Amo14g0281 974 SMART LRR_typ_2 152 175 IPR003591 -
Amo14g0281 974 SMART LRR_typ_2 453 475 IPR003591 -
Amo14g0281 974 SMART LRR_typ_2 429 452 IPR003591 -
Amo14g0281 974 ProSitePatterns Serine/Threonine protein kinases active-site signature. 750 762 IPR008271 GO:0004672|GO:0006468
Amo14g0281 974 Gene3D Phosphorylase Kinase; domain 1 586 702 - -
Amo14g0281 974 ProSiteProfiles Leucine-rich repeat profile. 131 153 IPR001611 GO:0005515
Amo14g0281 974 MobiDBLite consensus disorder prediction 494 516 - -
Amo14g0281 974 PANTHER OSJNBA0070M12.3 PROTEIN 53 974 - -
Amo14g0281 974 Gene3D Ribonuclease Inhibitor 366 490 IPR032675 -
Amo14g0281 974 ProSiteProfiles Protein kinase domain profile. 625 905 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g0281 974 SUPERFAMILY L domain-like 93 474 - -
Amo14g0281 974 SUPERFAMILY Protein kinase-like (PK-like) 601 910 IPR011009 -
Amo14g0281 974 SMART serkin_6 625 905 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g0281 974 MobiDBLite consensus disorder prediction 492 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g0281 Amo-Chr14 3859599 3863826 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g0281 108 901 Receptor kinase-like Gene Family AT5G07280 32.598 7.08e-96 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Amo14g0281 PK_Tyr_Ser-Thr 4.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g0281 - - gmx:100781851 1313.13