Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g0247 ATGCAATGCCACTCGCCAATGGCGACGACTTCGTTTAACACTCGTTGCCCTTACTACTCACTTTCACTTTTCCTCCTCCCTTTGCTTATGGATAGCGAAGATCAAAGAATAACTCAAACTCAAGGAAATGAGAATCATGGAGTTCATGTATGTAACAAATGTGGATGGCCTTTTCCAAATCCACACCCCAGTGCCAAACATAGGCGTGCTCACAAGAAAAACTGTGGAACCATTGAAGGTTACAAGCTTTTGGTCTCAGAGGGTCAAACCCTGAATCCTTCAGACGATGAACACTTCTCTGATAATGATCACAAAACACAAGCTGCAGAAGAGAGTCCATCAATTTCCAAATCAAGAAATGATATTGTAGCACAAACTCCTAAAATTTTGCAAAGTGAGAGGAATGATGATTGTAACCTGCTGGAGTTACAAGATTTGAAAAWTGATGATTCTTTTGCTCTCYCAAGTGACTCAAATACCTGCAGATCTGAAGCCATGTCTGATGTGTTGCTGGACAATAAGATCTATGTTGATGGAACGAAGGYGACYACTTTGAAAGAAAAGGATGAAATCAAACCAGATAGAGACATGTTTGAGATTGTGGAATCTTCCGACAGCACCATAGGTAGAACATTTGAGGGAGTGTCTGGAGCAGTTACTGAAGTGGTTAGCTTGAAATCTCAAGTTACTGATGGAGCTTTTATTCTGAAGGAAAATAATGGCTCTGGCTTCCCTTCTGTTATGCCCCAAGAAGATCTTTTTCTTGAAGCAGAATCTGCTCAGAGCATGAATGATTCCAAAGATGGCATACGGGTAGAGTCAGAGCACATGACAGAGCTTGCTACTTCTAGTGAGATCATGATATCACGGGAAAGGGAAGAAGTAAATGTTGATATGCTTACATTTCCTTCATGTGATGATAGACCTGATGTGGCACACCCTCAGATTGAGTATGAATATCATGAACCAGTGGTCTCTCAAAATTCTGCAAGTCTACATTTGTCTAAAGCATTGGAACAAGGGCATGATAGCTTGAAGGATTCTGTTACCGGGGAAAATGATTTTCTTATCAACCAAGGCCAACTGAGCAAAAAAGGATATCGTCTCTCGCAAGATATGCATTCATTGAATAGTAACATGAAAAAGCAGGTGAACTGTGAGCTTATGGCTGCAGAAATGCATGCTGAAGAGTGCATTGAGGTTTTCAATGGCGAAAGTAACAGAAGATTACATGAAACTGGAGCCTTTATGAATGATATGAAAACTGAGAAGAATGAGAATCATGTGGTTCATTTTTCTGAAGAACGGGTACCAAATGATGCTCATAAAAACTCACAACAGATTGATGTACCCAAAGGTAGTTTAATGGCTGCATCAGATGAGAACGCCTGTGATGCATCCTTTGTATCTGCAACTAGTCAAACAACTGCTGTAATTATCGGGGACAATACAACTCATCATGAGGGAAACATAACCAGCATAGCTGTAGATGACGAATGCAGAAGGGCTAATATTGAAAATGATACTGGAATATGCATGAATACTCTTCAATCCAGTAATGCGCTTTCGGAGATCAATTCATCAAGTATATGTAATGAATATGGTGTTGAAATGGGTAAATTTGAGCAATCTGATATAATAGATGCACAACATGCTGAAAGTGGTATTGTGAAAGATGCTACATTACCAGATACTTTTGAATCTACAATTCTTTCAGAGGTTGTAATAGATGGGCCTAAAGGGACACCTGAAGATATTGAATGCTCAAATAGAAGTCCATTATCTTGTACTCACGAAAAAATCAAAGAAGAGGAAATCAATAGCATAGACAGATCAAATGAATACAGTAATATAGTTGCTAGTATTTCTGCTGCTCCTCATCAAACACAAGACGAGGAACTATTACTTAAGGCTACAGAAGGCATTGATTTAATTGAAGATTCCAATAGAACTGGTAGAGACCATTCTTTAAATATTGAGCCTTCTTATCAGTGTGTTTCTCCTGTCGAAGATTCTCAAGTTGGGCAGCATGACAAGAAAGTTCCTGGAGTTGTTGCTGTCCCTATTCAAGATCAAAGAGATCTCCCTGTGCAATCTGATGTACAAGCTACTAATGAAGTGGAAGCTATAGCATCAACTGATTTGTCGATGTCAACAGAGACAGAAAAATCCAACTTGAAGTACCCAGAGGCATCTGAGGAACAGCAGTATGAAAAATCCGAAATGTTTGAACCACCTTCTTTCATGACATTGGTCGAACCTGGACTCATGCTTGGCCCAAAATCTGCACCCGAAGTCGAGACAGATCCAAACAAGCAGAAACCGGATTCTAACTCTTCACAGGCTGCTTGGTTTCCCACTCTAACTCACAATGCCAATGAGTCTGAAGGGAGAAAGAGGAATGAAGAAATAATAGCCAAGGTAACAAGAAAGCAGAACACACCTCTCAAGAGTCTTTTGGTTGAGGCTGCTCATAACAGCAAAAAGTCAAAGTCGCCCAAATCAGAAAAAGATTCCGTGAATCAGAAACATGTTAGAGTCACAGAAGATAATGGTTCTGGATTGACTACTGTTAACTCCATTCTGGGTTGTGAATCTCCCGCAATGCAGATTATGAACCGAGAGAGTACGGAAGAATGGAACTCCRCGGKTGACATAACAAGAAAAAAGAAGAAAGACAAGAGCAGATCACACTGGATACAATTGTTGTGTTGTTCATCTGTCGAAACTCGGTGA 2736 0.4002 MQCHSPMATTSFNTRCPYYSLSLFLLPLLMDSEDQRITQTQGNENHGVHVCNKCGWPFPNPHPSAKHRRAHKKNCGTIEGYKLLVSEGQTLNPSDDEHFSDNDHKTQAAEESPSISKSRNDIVAQTPKILQSERNDDCNLLELQDLKXDDSFALXSDSNTCRSEAMSDVLLDNKIYVDGTKXTTLKEKDEIKPDRDMFEIVESSDSTIGRTFEGVSGAVTEVVSLKSQVTDGAFILKENNGSGFPSVMPQEDLFLEAESAQSMNDSKDGIRVESEHMTELATSSEIMISREREEVNVDMLTFPSCDDRPDVAHPQIEYEYHEPVVSQNSASLHLSKALEQGHDSLKDSVTGENDFLINQGQLSKKGYRLSQDMHSLNSNMKKQVNCELMAAEMHAEECIEVFNGESNRRLHETGAFMNDMKTEKNENHVVHFSEERVPNDAHKNSQQIDVPKGSLMAASDENACDASFVSATSQTTAVIIGDNTTHHEGNITSIAVDDECRRANIENDTGICMNTLQSSNALSEINSSSICNEYGVEMGKFEQSDIIDAQHAESGIVKDATLPDTFESTILSEVVIDGPKGTPEDIECSNRSPLSCTHEKIKEEEINSIDRSNEYSNIVASISAAPHQTQDEELLLKATEGIDLIEDSNRTGRDHSLNIEPSYQCVSPVEDSQVGQHDKKVPGVVAVPIQDQRDLPVQSDVQATNEVEAIASTDLSMSTETEKSNLKYPEASEEQQYEKSEMFEPPSFMTLVEPGLMLGPKSAPEVETDPNKQKPDSNSSQAAWFPTLTHNANESEGRKRNEEIIAKVTRKQNTPLKSLLVEAAHNSKKSKSPKSEKDSVNQKHVRVTEDNGSGLTTVNSILGCESPAMQIMNRESTEEWNSXXDITRKKKKDKSRSHWIQLLCCSSVETR* 912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g0247 911 MobiDBLite consensus disorder prediction 86 128 - -
Amo14g0247 911 ProSitePatterns Zinc finger C2H2 type domain signature. 51 71 IPR013087 -
Amo14g0247 911 MobiDBLite consensus disorder prediction 752 854 - -
Amo14g0247 911 MobiDBLite consensus disorder prediction 773 792 - -
Amo14g0247 911 MobiDBLite consensus disorder prediction 827 845 - -
Amo14g0247 911 MobiDBLite consensus disorder prediction 94 110 - -
Amo14g0247 911 MobiDBLite consensus disorder prediction 793 807 - -
Amo14g0247 911 PANTHER PENTATRICOPEPTIDE REPEAT (PPR) SUPERFAMILY PROTEIN 30 119 - -
Amo14g0247 911 PANTHER PENTATRICOPEPTIDE REPEAT (PPR) SUPERFAMILY PROTEIN 112 908 - -
Amo14g0247 911 MobiDBLite consensus disorder prediction 111 128 - -
Amo14g0247 911 PANTHER PENTATRICOPEPTIDE REPEAT (PPR) SUPERFAMILY PROTEIN 112 908 - -
Amo14g0247 911 PANTHER PENTATRICOPEPTIDE REPEAT (PPR) SUPERFAMILY PROTEIN 30 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g0247 Amo-Chr14 3341345 3345597 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Amo14g0247 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g0247 - - aip:107638253 1654.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g0247 14 3341345 3345597 Amo14g0247 14 3341345 3345597 ECH