Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g0240 ATGGACCTGCACCCCGAAACCGCAACGACCTCCTCTCCCACCTTCGCTTCCATCGGCCGCAGGAGCCTCAAGGACATGTCCATTTCCGAGCTCATTTCCGTTCTGCGCGCCGATTTCGACACCGTTGAAGAGGTTTTGTTGGCCAGAGACGCCAAACACAGAGCTGAGATCAGTCCACTTTATGAAAAGATCGAATTAGAGAGGCTAACGAGGCTTCGACTGGAATCGGAGCTGAAGACGAAGCAGGAGGAGCAGCGTTGTCACAGGTGTGAGAGAACACAAGAGGGTTACGAAATGTTGCTGAAGGAAGTGAAGAAGAGCGGGTTGAATGATTATAAGAACAATGCTATTATTGAAGAATTAAGGAACACGAATCGAGAGTTGGAGATTCAAAATAACAAAGCAACTGATGAATTGGCTACGATTAGGATCAGATGCAGTCAATTGGAGAATGCAAGGAATGTGAGTTTGGCTACCATTGAGAAGCTTAGGGTTGAGAATTGCAAATTGAGAAAGGAATTGAATAAAGGGGTTAATGTTGTAGTCAAAGATGAGCAAGACAAGGAATTCAATGAAATGGATGTTTGCGGTTCTGCCTCTTTGCAAAGAATTAAAGACATTGGCCAAGGCCAATCTTCATCAGGTGGACTGTTCTTTAAAGTGTTGGATATGGATTCATGCAACAATGTGTCAGGGGATGCTGCATTTGAAGCTGTTGCTGAGGTTTACTCAGAGAGTGATGACGATGGACATTTAGAACCAGTTCCTAGAATGGAGTTTGATTCCTTAGAAGCTGTTCAGACATTTTACAAGAGGTATGCGAGGCTAATTGGTTTTGGTTGGAAGATCAGGACCTCGAAAAAAGGGTTTGATGGGAGACCAAATTATGTGGTACTTGCATGCACTCGTGGGGATCGCCGTCTATCTAGTATTTCGACAACTCTTCCAACCCAATTCACAAAATGTTCTGCAAAGATCAATGTGAAGAAAGGGAAAGATGGAAAGTGGATGATTAGAAAGGTAGATCTTGAACACAACCACGACTTAAGCCCTTTAAATTTAAAATACTCAGGAAACACGACTATTAGCACACTCATTTAG 1101 0.4342 MDLHPETATTSSPTFASIGRRSLKDMSISELISVLRADFDTVEEVLLARDAKHRAEISPLYEKIELERLTRLRLESELKTKQEEQRCHRCERTQEGYEMLLKEVKKSGLNDYKNNAIIEELRNTNRELEIQNNKATDELATIRIRCSQLENARNVSLATIEKLRVENCKLRKELNKGVNVVVKDEQDKEFNEMDVCGSASLQRIKDIGQGQSSSGGLFFKVLDMDSCNNVSGDAAFEAVAEVYSESDDDGHLEPVPRMEFDSLEAVQTFYKRYARLIGFGWKIRTSKKGFDGRPNYVVLACTRGDRRLSSISTTLPTQFTKCSAKINVKKGKDGKWMIRKVDLEHNHDLSPLNLKYSGNTTISTLI* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g0240 366 Coils Coil 64 84 - -
Amo14g0240 366 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 161 350 - -
Amo14g0240 366 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 161 350 - -
Amo14g0240 366 Coils Coil 114 152 - -
Amo14g0240 366 Pfam FAR1 DNA-binding domain 268 350 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g0240 Amo-Chr14 3229451 3233207 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo14g0240 FAR1 4.8e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g0240 - - ahf:112795650 699.893