Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g0180 ATGGATTCCGAGGCTGGCGTTGTGGAGAAAGATCCAACTGCGCGATATGTACGGTATGATGAATTGTTGGGGAAAGGAGCGTTCAAGACTGTATATAAGGCGTTTGATGAAGTAGATGGAATAGAAGTGGCGTGGAACCAAGTCAACGTGGAGGATGTTTTGCAATCACCGCAACAATTGGAAAGATTGTACTCTGAGGTTCATTTCCTCAAGTCATTGAAACACGAGAATATCATCAAATTCTACAATTCTTGGGTCAATGAAAAGTCCCGGACTATCAACATCATCACCGAGTTGTTTACCTCTGGCAGTTTGAGGCAATACAGAAAGAAACACAAGAACATTGATATGAAAGCCATGAAGAATTGGTTGAGGCAGATTCTTCGAGGATTATGCTATCTGCATGGCCATAATCCGCCGATAATTCATAGGGATCTGAAATGTGATAACATCTTCGTCAACGGTAATACAGGACGTGTTAAGATTGGAGATCTTGGATTGGCAGTTGTGATGCAGCAGCCTCTTGCTCAGAGTGTTATAGGCACGCCGGAATTTATGGCACCGGAACTTTATGAAGAACAATATAATGAACTTATTGACATATATTCTTTTGGCATGTGTGTGTTGGAAATGGTCACCTGTGAATACCCATATAGTGAATGTAGAAATCCGGCACAGATATATAAGAAAGTTACTTCTGGTATAAAGCCTGCCGCTCTGGCTAAAGTACATGATTTGAAATTGAGAGAATTTATTGAGAAGTGTCTAGTTCCAGCAGCTATGCGACTGCCGGCGTCTGAACTGTTGAAAGACCCATTCCTTGTTGCTGAAAGCCCGAAGGAGATCAATCATGATACACTACTGCAGCTGACTAATCCGCCAATATCTGAGCCTTGTCCTATGGAGACAGACTCAAGCTCCAGGCATACTTCACATGGTTCCTCTGTGAGTAGTATTGAAGAAACTTCCTTAGTTTCAGTGTTCGATCTTCTGCAGGTGACTCAGAAAAACGAATTCCGGTTAAGAGGGGAGAAAACTGCCAACAGTACAATTTCACTTACCCTGCGAATTGCGGATGCATGCGGTCGAGCAAGGAATATCCATTTTCCGTTTTATACCCATTCTGACACGGCCAACTCAATTGCTGTGGAGATGGTTGAGCACCTGGAACTTGCGAAGGAGGATGTAACTGTGATTGCTGAGCTAATACAAAACATGATTCTGAAGCTCATGCCCAACTGGAAACCTTCCTCTCATTCCTCTCTCAACTTGTCATCTGAAAAAGATCACTTGTACAAGCCTTTGGAAGAACTTCGGAGCTGTGGAACATCAAGTTGCCAGTGGCCATCACTATCAAGTGTTTTTGATACAAAAGCAATCCAAGATGATTCTGTTCGCTTACATCATGATGGAGAAAATCATTATATACAAGAATCTGTTATGTCAGAGATTTCATCAGAGTATGGAACTACATTTGCTTTATATTCGAAGAGTGAAGAGCATGATAGCTTTAGTATGGACGGATGCTGCAAATGTTCCAATGGCTTCAATACCAATTCAGATGCCGGGTTCTGTGCTCAAGATGATAATGAACAAAAGAATGAAGTTGACCAATCAGAGAAATCAGCAGGCGTTATCAATTCACAATGCAGTGCATTCGAAAACTTTGACGTGTCAAGCATATGTTCTGTTACTCTAGCCGGCATAGATAATTCAAACGAGCTACAGCTGGAGCTTGATGCAATTGAAACGCAGTATCACCAATGTTTTCGTGAGCTCGTGAAGATGAGGGAGGACGCCATAGAAAACGCCAAACGGAGGTGGATTACAAGGAAGAAAATATCAGTTATATGA 1854 0.4207 MDSEAGVVEKDPTARYVRYDELLGKGAFKTVYKAFDEVDGIEVAWNQVNVEDVLQSPQQLERLYSEVHFLKSLKHENIIKFYNSWVNEKSRTINIITELFTSGSLRQYRKKHKNIDMKAMKNWLRQILRGLCYLHGHNPPIIHRDLKCDNIFVNGNTGRVKIGDLGLAVVMQQPLAQSVIGTPEFMAPELYEEQYNELIDIYSFGMCVLEMVTCEYPYSECRNPAQIYKKVTSGIKPAALAKVHDLKLREFIEKCLVPAAMRLPASELLKDPFLVAESPKEINHDTLLQLTNPPISEPCPMETDSSSRHTSHGSSVSSIEETSLVSVFDLLQVTQKNEFRLRGEKTANSTISLTLRIADACGRARNIHFPFYTHSDTANSIAVEMVEHLELAKEDVTVIAELIQNMILKLMPNWKPSSHSSLNLSSEKDHLYKPLEELRSCGTSSCQWPSLSSVFDTKAIQDDSVRLHHDGENHYIQESVMSEISSEYGTTFALYSKSEEHDSFSMDGCCKCSNGFNTNSDAGFCAQDDNEQKNEVDQSEKSAGVINSQCSAFENFDVSSICSVTLAGIDNSNELQLELDAIETQYHQCFRELVKMREDAIENAKRRWITRKKISVI* 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g0180 617 MobiDBLite consensus disorder prediction 298 317 - -
Amo14g0180 617 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 351 407 IPR024678 GO:0004674|GO:0005524
Amo14g0180 617 CDD STKc_WNK 15 274 - -
Amo14g0180 617 SMART serkin_6 17 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g0180 617 Gene3D Phosphorylase Kinase; domain 1 1 98 - -
Amo14g0180 617 PANTHER WNK KINASE 4 612 - -
Amo14g0180 617 Gene3D - 349 436 - -
Amo14g0180 617 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
Amo14g0180 617 Pfam Protein kinase domain 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g0180 617 SUPERFAMILY Protein kinase-like (PK-like) 20 321 IPR011009 -
Amo14g0180 617 Gene3D Transferase(Phosphotransferase) domain 1 100 280 - -
Amo14g0180 617 ProSiteProfiles Protein kinase domain profile. 17 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g0180 617 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 4 612 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g0180 Amo-Chr14 2417946 2421938 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g0180 4 616 MAP Kinase Kinase Kinase AT5G41990 50.729 0.0 566
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Amo14g0180 Pkinase 8.2e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g0180 K08867 - gmx:100783717 773.467