LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Amo14g0164	ATGTTCACGGATGCAATAGGGAATGCAGGGTACTCTCTGCTGAACGATTTAAGAGCTGAAATTGAAGTGAAGGATGGAACTTTTTCTCTCTGCTTTTGGGTTTATTTGGCCAACTCAACTACATTTCCTGCTACCATTATTCAGCAGGTTTGCTCTGATGTTTCTGAAAGTGCTCCTTTCCTTGTTATAAATGATCACAAGAGAATTAATCTTCTACCGCTTCTTCTCTTACATGAAGAAGCTCCTGATACTGGCAATATCAATTCCTTGACGGAAGTTGCATATGCAACTGTAGATTTTGAGTTTCCATTGCAAAATTGGGTTCACATTGGATGTGAGGTTTGCCCTAATCACATGAAACTACAGATTAATGGAGAGATTGTTGGAGAAAAACCGCTGTCATCAAATAAGGAACCCAGTTCAAATGATTTGAGGAAAATAGTTTTGGCAAATATTGGTGGAGATGGAAATATTTCACACGGTTATGTGTACAATTTTCAAGTTTTCCCTTCTGTTTCATCTATTAAAGATCACCATATGAAGGATCCTCCTCTAAAGTTATCTATTGATGAGTCATCTGCCTCTGAGATTGAAGAAGAAGTGATGGTGTTTGGAGCATTGTTGGCATCTTGTCGTAGGAACTTCTCTTTGGACGTTGTACTATTAGATGTTTTTGGCCAACCTGTTGATAAGGAGAATGAGGTTTATGCTTCACTTTTGTATGCTGACACACGGGCACCAGTGGAGAATACAATTGATGAAGAAGCACCCATTTTGGCTAGCTATGATGGAATTGAATTTCCTTCTTATGAAAGACCGAGTAAACTTTTACTGGGCCGTGCATCTTTTAAGCTGAAGATATCTCAGCTTTCATCCAAGTGTGATAACAGGTTGTTCCTCATCAAATTCTGTGTTCCAAAATTAGGAAATTATCCTTTTTTTGAGGCACTCTCCCGTCCAATTCGATGCATCTCCAGGAGTCGTAATACCCGATTGTCTACCCTGGTGTGGAAAAGGTCACCTGGTCTTCCTAAGCATAATTTAATGCAATCTTCAGGAATGGATGATGCATCCTTTGAACATCAGCATCCTGTTTGTGAGGCAAAATCTAATCCATTAACGAAGCGATTCAGATTTGGACATGACAAGATATCCGTATCAGTGAAGGCTGACACCAACCTAGAGCAACCTGACGAGGAATGTAATTCTCATGCCCGGACTACTAATCAGGTTGAGAATGGGCTTACAACTGGCTTGTATGGCACACCTGCTAACTACGAGGCATATGAGACTCTGTCTGATTCAGAGAGTATAGGGGAGAGAAATTCACCTTCAAATAATGTGGCAAGTAGAAGATATCCAATATCTGACATGACTGTTTTTAAGTACTGCTTGGCTGGCTTGGCTGAGAGATCGCTGATGCTTAAGGAGATTGCATCCTTGGCCTCAAAGAAAGAAATTTCAGAGTTGGCCCATCATGTGTCACTTTATTCAGGATGTTCACACCATGGAAATCAAATATTAATTGCCAAAAAATTGGTGGAAGATGGAACTAATCTTTGGAAGATGATGTCTCCAAACAACAACCACGTTCCTTGGGAGAGTGCAGTGTATGAGATTGAAGAGCAATTCATGAAGATTGCTTGCAGTTCGCGATCTCTCTCACATCAGGACCTAGAGCTTCTAAGAGTTATTGCTGGATGTCAAGAGTATTTAGCCCAAGAAAACTTTGAGAAGTTATGGTGTTGGTTGTACCCTGTGGCTTACATAATTTCAAAGGAGCGGGTAAACCCTATCTGGAATTCTACATCACCTAAGTGGATAGAAGGATTCATAACTAAGGAGGAAGCAGAAGCTTCGCTTCAAGGTCCCACAGGACTTCAAGAACCAGGTACATTTGTATTGAGATTCCCCACCTCAAGAAGCTGGCCCCACCCAGATGCAGGTAGCCTAATTGTCACATATGTTGGCAATGATTACAAACTTCACCACAGGCTACTTTCGGTGGATCGTGTTTTTGGCTCTGGTGATAAAGGAATCGACATGAAGCCACTCCAAGCTATGCTAATGGAAGAACCTGAGTTGACTCGATTGGGAAGGATAATAAGAGGCCAATAG	2118	0.4122	MFTDAIGNAGYSLLNDLRAEIEVKDGTFSLCFWVYLANSTTFPATIIQQVCSDVSESAPFLVINDHKRINLLPLLLLHEEAPDTGNINSLTEVAYATVDFEFPLQNWVHIGCEVCPNHMKLQINGEIVGEKPLSSNKEPSSNDLRKIVLANIGGDGNISHGYVYNFQVFPSVSSIKDHHMKDPPLKLSIDESSASEIEEEVMVFGALLASCRRNFSLDVVLLDVFGQPVDKENEVYASLLYADTRAPVENTIDEEAPILASYDGIEFPSYERPSKLLLGRASFKLKISQLSSKCDNRLFLIKFCVPKLGNYPFFEALSRPIRCISRSRNTRLSTLVWKRSPGLPKHNLMQSSGMDDASFEHQHPVCEAKSNPLTKRFRFGHDKISVSVKADTNLEQPDEECNSHARTTNQVENGLTTGLYGTPANYEAYETLSDSESIGERNSPSNNVASRRYPISDMTVFKYCLAGLAERSLMLKEIASLASKKEISELAHHVSLYSGCSHHGNQILIAKKLVEDGTNLWKMMSPNNNHVPWESAVYEIEEQFMKIACSSRSLSHQDLELLRVIAGCQEYLAQENFEKLWCWLYPVAYIISKERVNPIWNSTSPKWIEGFITKEEAEASLQGPTGLQEPGTFVLRFPTSRSWPHPDAGSLIVTYVGNDYKLHHRLLSVDRVFGSGDKGIDMKPLQAMLMEEPELTRLGRIIRGQ*	706

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Amo14g0164	705	SUPERFAMILY	SH2 domain	601	669	IPR036860	-
	Amo14g0164	705	PANTHER	SIGNAL TRANSDUCER AND ACTIVATOR OF TRANSCRIPTION	8	702	IPR001217	GO:0003700\|GO:0006355\|GO:0007165
	Amo14g0164	705	SUPERFAMILY	Concanavalin A-like lectins/glucanases	25	172	IPR013320	-
	Amo14g0164	705	Gene3D	SH2 domain	593	702	IPR036860	-
	Amo14g0164	705	ProSiteProfiles	Src homology 2 (SH2) domain profile.	607	705	IPR000980	-
	Amo14g0164	705	PANTHER	SIGNAL TRANSDUCER AND TRANSCRIPTION ACTIVATOR	8	702	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Amo14g0164	Amo-Chr14	2152881	2170587	Dispersed/Wgd

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	STAT	Amo14g0164		None	None	None

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Amo14g0164	-		-	gmx:100803169	1081.63