Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g0143 ATGGATTCCGAGGCTGGCGTTGTGGAGAAAGATCCAACTGCGCGATATGTACGGTACGATGAATTGTTGGGGAAAGGAGCGTTCAAAACTGTATATAAGGCGTTTGATGAAGTAGATGGAGTAGAAGTGGCGTGGAACCAAGTCAACGTGGAGGATGTTTTGCAATCACCGCAACAATTGGAAAGATTGTACTCTGAGGTTCATTTCCTCAAGTCATTGAAGCACGAGAATATCATCAAATTCTACAATTCTTGGGTCAATGAAAAGTCCCGGACTATCAACATCATCACCGAGTTGTTTACCTCTGGCAGTTTGAGGCAATATAGAAAGAAACACAAGAACATTGATATGAAAGCCATGAAGAATTGGTTGAGGCAGATTCTTCGAGGATTATGCTATCTGCATGGCCATAATCCGCCCATAATTCATAGGGATCTGAAATGTGATAACATCTTCGTCAACGGTAATACTGGACGTGTTAAGATTGGAGATCTTGGATTGGCAGTTGTGATGCAGCAGCCTCTTGCTCAGAGTGTTATAGGCACGCCTGAATTTATGGCACCGGAACTTTATGAAGAACAATATAATGAACTTGTTGACATATATTCTTTTGGCATGTGTGTGTTGGAAATGGTCACCTGTGAATACCCATATAGTGAATGTAGAAATCCGGCACAGATATATAAGAAAGTTACTTCTGGTATAAAGCCTGCCGCTCTGGCTAAAGTACATGATTTGAAATTGAGAGAATTTATTGAGAAGTGTCTAGTTCCAGCAGCTATGCGACTGCCGGCGTCTGAACTGTTGAAAGACCCATTCCTTGTTGCTGAAAGCCCGAAGGAGATCAATCATGATACACTACTGCAGCTGACTAATCCGCCAATATCTGAGCCTTGTCCTATGGAGACAGACTCAAGCTCCAGGCATACTTCACATGGTTCCTCTGTGAGTAGTATTGAAGAAACTTCCTTAGTTTCAGTGTTCGATCTTCTGCAGGTGACTCAGAAAAACGAATTCCGGTTAAGAGGGGAGAAAACTGCCACCAGTACAATTTCACTTACCCTGCGAATTGCCGATGCATGCGGTCGAGCAAGGAATATCCATTTTCCGTTTTATACCCATTCTGACACGGCCAATTCAATTGCTGTGGAGATGGTTGAGCACCTGGAACTTGCGAAGGAGGATGTAACTGTGATTGCTGAGCTAATACAAAACATGATTCTGAAGCTCATGCCCAACTGGAAACCTTCCTCTCATTCCTCTCTCAACTTGTCATCTGAAAAAGATCACTTGTACAAGCCTTCGGAAGAACTTCGGAGCTGTGGAACATCAAGTTGCCAGTGGCCATCACTATCAAGTGTTTTTGATACAAAAGCAATTCAAGATGATTCTGTTCGCTTACATCATGATGGAGAAAATCATTATATACAAGAATCTGTTATGTCAGAGATTTCATCAGAGTATGGGACTACATTTGCTTTAGATTCGAAGAGTGAAGAGCATGATAGCTTTAGTATGGACGGATGCTGCAAAGGTTCCAATGGCTTAAATACCAATTCAGATGCCGGGTTCTGTGCTCAAGATGATAATGAACAATCAGAGAAATCAGCAGGCGTTATCAATTCACAATGCAGTGCATTCGAAAACTTTGACGTGTCAAGTATATGTTCTGTTGCTCTAGCCGGCATAGATAATTCAAACGAGCTACAGCTGGAGCTTGATGCAATAGAAACGCAGTATCACCAATGTTTTCGTGAGCTCGTGAAGATGAGGGAGGACGCCATAGAAAACGCCAAAAGGAGGTGGATTACAAGGAAGAAAATATCAGTTATGTGA 1836 0.4232 MDSEAGVVEKDPTARYVRYDELLGKGAFKTVYKAFDEVDGVEVAWNQVNVEDVLQSPQQLERLYSEVHFLKSLKHENIIKFYNSWVNEKSRTINIITELFTSGSLRQYRKKHKNIDMKAMKNWLRQILRGLCYLHGHNPPIIHRDLKCDNIFVNGNTGRVKIGDLGLAVVMQQPLAQSVIGTPEFMAPELYEEQYNELVDIYSFGMCVLEMVTCEYPYSECRNPAQIYKKVTSGIKPAALAKVHDLKLREFIEKCLVPAAMRLPASELLKDPFLVAESPKEINHDTLLQLTNPPISEPCPMETDSSSRHTSHGSSVSSIEETSLVSVFDLLQVTQKNEFRLRGEKTATSTISLTLRIADACGRARNIHFPFYTHSDTANSIAVEMVEHLELAKEDVTVIAELIQNMILKLMPNWKPSSHSSLNLSSEKDHLYKPSEELRSCGTSSCQWPSLSSVFDTKAIQDDSVRLHHDGENHYIQESVMSEISSEYGTTFALDSKSEEHDSFSMDGCCKGSNGLNTNSDAGFCAQDDNEQSEKSAGVINSQCSAFENFDVSSICSVALAGIDNSNELQLELDAIETQYHQCFRELVKMREDAIENAKRRWITRKKISVM* 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g0143 611 MobiDBLite consensus disorder prediction 298 317 - -
Amo14g0143 611 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 351 407 IPR024678 GO:0004674|GO:0005524
Amo14g0143 611 CDD STKc_WNK 15 274 - -
Amo14g0143 611 SMART serkin_6 17 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g0143 611 SUPERFAMILY Protein kinase-like (PK-like) 20 319 IPR011009 -
Amo14g0143 611 Gene3D Transferase(Phosphotransferase) domain 1 100 280 - -
Amo14g0143 611 PANTHER WNK KINASE 4 606 - -
Amo14g0143 611 Pfam Protein kinase domain 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g0143 611 Gene3D Phosphorylase Kinase; domain 1 1 98 - -
Amo14g0143 611 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
Amo14g0143 611 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 4 606 - -
Amo14g0143 611 ProSiteProfiles Protein kinase domain profile. 17 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g0143 611 Gene3D - 349 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g0143 Amo-Chr14 1912336 1915762 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g0143 4 610 MAP Kinase Kinase Kinase AT5G41990 50.900 0.0 570
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Amo14g0143 Pkinase 3.8e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g0143 K08867 - gmx:100783717 778.474