Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g0110 ATGAAGATGACATTGAGTTCCTTGTTCCTGAGTTGTTACAAGGGTGATCATTCTGATTACCCACAGTCTCCTAAGAAATCAAACAACAAAGTGGTGGCAACCAAGGGTCATAGTACTACTAGGAGCGGTTCTAACAGGGTTTCCGTTACCGATTTGAGTTTTCCAAGTGCTACCACGCTCTCTGAGGAGATCTCCATATCTCTAGCAGGGACCAACCTTTATGTGTTCACACTCGCCGAACTCAAGATCATTACTCAGAGCTTCTCATCGAGTAACTTTCTTGGTGAAGGAGGCTTCGGACCTGTCCACAAAGGCTTCATTGATGATAAGGTAAGGCCTGGTCTCAAGGCTCAGCCTGTTGCTGTTAAGCTTTTGGATTTGGATGGAACTCAAGGCCACAAGGAGTGGTTGACTGAAGTTGTGTTTCTGGGTCAACTGAGTCACCCGCACCTTGTGAATTTGATTGGATACTGCTGTGAAGAGGAACATAGGCTTCTGGTGTATGAGTATTTACCACGAGGCAGCTTAGAGAATCAACTCTTTAGAAGATACTCTGCGTCATTGCCATGGTCAACAAGAATGAAGATTGCTGTTGGAGCAGCCAAAGGTCTATCCTTTCTCCATGAACAAAAGAAGCCAGTAATCTATAGAGATTTCAAGGCTTCAAACATCTTGTTAGACTCTGATTACAATGCAAAGCTATCTGATTTCGGGTTGGCAAAAGACGGGCCTGAAGGAGATGACACACACGTGTCAACACGAGTGATGGGGACACAAGGGTATGCAGCACCGGAATACGTGATGACAGGTCACTTGACAGCAATGAGTGACGTGTACAGCTTCGGAGTGGTGCTGTTGGAGATGCTGACAGGAAGAAGATCAGTGGACAAGGGGCGTCCATCAAGAGAACAGAATCTGGTGGAATGGGCGAGGCCTGCACTCAACGATTCAAGGAAGCTGGGGAGGATCATGGATCCAAGGCTGGAGGGACAGTACTCTGAGATGGGTGCAAAGAAAGCAGCAGCCTTGGCTTACCAGTGCCTCAGCCATAGGCCTAGGAACCGTCCTTCTATGCCCGCTGTCGTTAAGATTCTTGAGCCACTCCAGGACTATGATGATGTCCCCATTGGACCCTTTGTTTACACTGTTCCAAATCATGCTGATACCAATGCTACCACACAAGCTCAAACTCCCAAGGAGAGGAAGAGGACTCACCACCATCACCACCGTAGGCATCCTCTCAAGTCGCCAAAGTCTTCACCAGATTCACACAATCATCATGCCACAACAAGTGCTTCTACTTCACCCGATGACAAATCCAATTAA 1326 0.4736 MKMTLSSLFLSCYKGDHSDYPQSPKKSNNKVVATKGHSTTRSGSNRVSVTDLSFPSATTLSEEISISLAGTNLYVFTLAELKIITQSFSSSNFLGEGGFGPVHKGFIDDKVRPGLKAQPVAVKLLDLDGTQGHKEWLTEVVFLGQLSHPHLVNLIGYCCEEEHRLLVYEYLPRGSLENQLFRRYSASLPWSTRMKIAVGAAKGLSFLHEQKKPVIYRDFKASNILLDSDYNAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLTAMSDVYSFGVVLLEMLTGRRSVDKGRPSREQNLVEWARPALNDSRKLGRIMDPRLEGQYSEMGAKKAAALAYQCLSHRPRNRPSMPAVVKILEPLQDYDDVPIGPFVYTVPNHADTNATTQAQTPKERKRTHHHHHRRHPLKSPKSSPDSHNHHATTSASTSPDDKSN* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g0110 441 Gene3D Phosphorylase Kinase; domain 1 48 170 - -
Amo14g0110 441 MobiDBLite consensus disorder prediction 22 44 - -
Amo14g0110 441 MobiDBLite consensus disorder prediction 400 415 - -
Amo14g0110 441 ProSitePatterns Serine/Threonine protein kinases active-site signature. 214 226 IPR008271 GO:0004672|GO:0006468
Amo14g0110 441 SUPERFAMILY Protein kinase-like (PK-like) 64 367 IPR011009 -
Amo14g0110 441 PANTHER OS01G0588500 PROTEIN-RELATED 35 412 - -
Amo14g0110 441 CDD STKc_IRAK 94 368 - -
Amo14g0110 441 MobiDBLite consensus disorder prediction 17 44 - -
Amo14g0110 441 Pfam Protein tyrosine and serine/threonine kinase 92 364 IPR001245 GO:0004672|GO:0006468
Amo14g0110 441 ProSiteProfiles Protein kinase domain profile. 88 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g0110 441 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 35 412 - -
Amo14g0110 441 MobiDBLite consensus disorder prediction 388 441 - -
Amo14g0110 441 MobiDBLite consensus disorder prediction 423 441 - -
Amo14g0110 441 Gene3D Transferase(Phosphotransferase) domain 1 171 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g0110 Amo-Chr14 1409149 1411034 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g0110 76 403 Glycoside Hydrolase AT3G07070 49.699 9.01e-102 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Amo14g0110 PK_Tyr_Ser-Thr 3.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g0110 - - gmx:100799411 683.715