Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g0109 TTTATACCGCGGGGACGGGGGACGGGGCCCCGTATAATAAACGGGGCGGGGGCGGGGGTAGAGGTCCCCGCTCCGTGTAGACCCTTCAAACCCTCAGTCCCTTCTGTCTCCTTCCCAAACACCGCCGACCACTGCCTCCCACGACCCAGCGCCACCTCCCACCTTCTGAGTGGCTCGGTCTCTCATTGGAGGTCCCGAGCTCACCGTGGCTGGTCGTCGTCTTCTCCTCTTCGCCGTTTGTCTGCCAAATCGCCGGTCTTCCCTGTGATTTCTGCGGCGGGGTTCCATGAACTGAGGAGGAATAGAATATTTTTACTTGGATTACAAAAGTTGGGCAAAGGTGATTGGCGTGTAATTGCAAGAAACTATGTCATATCAAGGACCCCTACTCAAGTGGCCAGTCATGCTCAAAAGTATTTCATCAGGCAAAATAATGTGTCTAGACGGAAAAGACACACCAGCTTGTTTGACATTGACGCAGATAAAGTTTTTACTCTTGTCTGCAATTACTATCCATGA 519 0.5222 FIPRGRGTGPRIINGAGAGVEVPAPCRPFKPSVPSVSFPNTADHCLPRPSATSHLLSGSVSHWRSRAHRGWSSSSPLRRLSAKSPVFPVISAAGFHELRRNRIFLLGLQKLGKGDWRVIARNYVISRTPTQVASHAQKYFIRQNNVSRRKRHTSLFDIDADKVFTLVCNYYP* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g0109 172 Gene3D - 99 146 - -
Amo14g0109 172 Pfam Myb-like DNA-binding domain 104 140 IPR001005 -
Amo14g0109 172 CDD SANT 102 140 IPR001005 -
Amo14g0109 172 PANTHER TRANSCRIPTION FACTOR KUA1 102 163 - -
Amo14g0109 172 SUPERFAMILY Homeodomain-like 101 145 IPR009057 -
Amo14g0109 172 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 101 143 IPR006447 GO:0003677
Amo14g0109 172 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 110 144 IPR017930 -
Amo14g0109 172 PANTHER OS01G0187900 PROTEIN 102 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g0109 Amo-Chr14 1396245 1397536 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Amo14g0109 Myb_DNA-binding 1e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g0109 - - nnu:104610453 110.538