Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g0094 ATGATTATCTCGGTATCTGGCTCCTCAGCTTGCAAACAAGTACAAGAGCCTCTAGTAAGTTTCCAAAAGGGATTTACGAACATGTTATATAATCGGAACAATAATAATAAGGATAAGGTGGTGGTGATATTGGGGGCCACCGGAACCGGAAAGACCAAGTTGGCCATAGACCTTGCCAACCACTTCCCACCGGCTGAGATTGTTAACTCCGACAAAATGCAAGTCTACAAGGGCCTTGACATCACCACTAATAAGGTTACTCCTCAAGAGGCTCGTGGGGTCCCACATCATCTACTTGGCACAATTCACCCCAATGCCAACTTCACCGCCCATGATTTTTGCCGCCAAGCCACCTCCGCCGTCGATTCCATCGTTGCTCGAGATGCCCTCCCCATCATCGCCGGTGGCTCCAATTCCTATCTTGATGCTCTCATCAACCACCACTCCACCTTTAGATTAAGGTACGAGTGTTGCTTCCTATGGGTGGATGTTTCAATCCCCATACTGCATGCGTCGCTTCGATCACGCGTGGATCGCATGATCGAAGCGGGACAAGTGGAGGAAGTGCGGAAATTCTTCGAGCCATTGGCAGATTACGAGAGGGGAATAAGAAGAGCGATAGGGGTGCCAGAGTTCAACGAGTTTCTAAGAGCAGAGGCCTTAGGAGCAGATGAAGAGACAAAGAAGATGCTCTTAGACATAGCCATTGCAAGAATCAAGGTCAACAACTGCACCCTCGCCAATCGCCAAATCCACAAGATTCAGCGACTCCACAACACCTGGAAGAGGACCATGCATCGCCTCGACGCCACGCAGGTTTTCTTGAACCGTAATTCCTCTGATCATCACCAATCTCAAAATTCCTGGGAGGAACATGTTCTTGCCAAGAGCCTTAGGATTCTTCACAAATTCCTCTACGAAGATAACAATAAACATCTTCTTGTTCCTTCCGGAATTAATGTTTCTTCTTCTTCGCCGCCGGTGGCAATGGCTGCCGTGGCGGCAGCTGCCACGCATTAG 1020 0.4902 MIISVSGSSACKQVQEPLVSFQKGFTNMLYNRNNNNKDKVVVILGATGTGKTKLAIDLANHFPPAEIVNSDKMQVYKGLDITTNKVTPQEARGVPHHLLGTIHPNANFTAHDFCRQATSAVDSIVARDALPIIAGGSNSYLDALINHHSTFRLRYECCFLWVDVSIPILHASLRSRVDRMIEAGQVEEVRKFFEPLADYERGIRRAIGVPEFNEFLRAEALGADEETKKMLLDIAIARIKVNNCTLANRQIHKIQRLHNTWKRTMHRLDATQVFLNRNSSDHHQSQNSWEEHVLAKSLRILHKFLYEDNNKHLLVPSGINVSSSSPPVAMAAVAAAATH* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g0094 339 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 198 IPR027417 -
Amo14g0094 339 Pfam IPP transferase 153 252 - -
Amo14g0094 339 Pfam IPP transferase 74 148 - -
Amo14g0094 339 Gene3D - 37 305 IPR027417 -
Amo14g0094 339 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 25 312 IPR039657 -
Amo14g0094 339 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 5, CHLOROPLASTIC 25 312 - -
Amo14g0094 339 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 166 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g0094 Amo-Chr14 1093959 1095641 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g0094 154 305 C2H2 Transcription Factor Family AT2G27760 29.213 1.05e-17 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g0094 K10760 - gmx:100812928 433.335
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo01g3610 01 108991598 108993186 Amo14g0094 14 1093959 1095641 PCT
Amo14g0094 14 1093959 1095641 Amo01g3610 01 108991598 108993186 PCT