Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g0084 ATGGTAAGGACTTCGCATAGACGGGGAGAAAAGTCTGTTTACCATTGGTCTCTTCCAAGCAACAAGCTTGAGTTTGAAGTTGTTCTGGAGGATGTTGTTTCGAATAGAAATAATGGTAACTGTAGCCCTGATGGTCATGGGGACAATGAAAGTGACAAAAAGAGGATGCGACGCCCGTATCGTGCGAAGAAATTTAAAGTAGAGATTAGCTATGCCGCCAAAATTCCAATGCAGGCCATTGCCAATGCCTTGCGTGGGCAGGAATCGGAGAATTTCCAAGAAGCCATCAGAGTGCTCGATATTATATTGAGGCAACATGCTGCTAAACAAGGTTGCCTCCTAGTTCGGCAATCCTTCTTCCACAATGACCCAAGGAATTTTGCTGAAGTTGGAGGTGGTGTGCTTGGCTGCAGAGGATTCCATTCAAGTTTCAGAACTACTCAGAGTGGCCTGTCTCTGAACATAGATGTCACAACTACTATGACAATCCAGCCTGGACCTGTTGTGGACTTCCTAATTGCCAATCAAAATGTGCGGGATCCATTTCAGCTTGACTGGGCAAAGGCCAAAAGGACCCTAAAAAATCTGAGGATTAAAGTAAGCCCATCCAATCAAGAGTACAAAATTACAGGTCTCAGTGAACTCCCATGCCGAGATCAGACGTTTTCTCTTAAGAAAGGTGGAAGGGATGGTGATGATGGTACTGAAGAAGTGACTGTTTATGATTATTTTGTCAATGCTCGTAGGATAGATCTTCGATACTCTGCTGAGCTTCCTTGTATCAATGTTGGCAAGCCTAAACGACCGACATACTTCCCCATTGAGCTTTGTGAATTGGTTCCTTGCAACGTTATACAAAACGCTGTCCACGCTTCAAAGGGCTTCATTGGTAGAGAAGTCCAGGCAGAAGCCACCAGAGAGGATGAGGGTTTTATCTGA 939 0.4473 MVRTSHRRGEKSVYHWSLPSNKLEFEVVLEDVVSNRNNGNCSPDGHGDNESDKKRMRRPYRAKKFKVEISYAAKIPMQAIANALRGQESENFQEAIRVLDIILRQHAAKQGCLLVRQSFFHNDPRNFAEVGGGVLGCRGFHSSFRTTQSGLSLNIDVTTTMTIQPGPVVDFLIANQNVRDPFQLDWAKAKRTLKNLRIKVSPSNQEYKITGLSELPCRDQTFSLKKGGRDGDDGTEEVTVYDYFVNARRIDLRYSAELPCINVGKPKRPTYFPIELCELVPCNVIQNAVHASKGFIGREVQAEATREDEGFI* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g0084 312 SMART DUF1785_2 113 165 IPR014811 -
Amo14g0084 312 ProSiteProfiles PAZ domain profile. 207 281 IPR003100 GO:0005515
Amo14g0084 312 Gene3D paz domain 159 284 - -
Amo14g0084 312 PANTHER TRANSLATION INITIATION FACTOR 2C, PUTATIVE-RELATED 9 284 - -
Amo14g0084 312 Pfam Argonaute linker 1 domain 115 162 IPR014811 -
Amo14g0084 312 Pfam N-terminal domain of argonaute 17 103 IPR032474 -
Amo14g0084 312 SUPERFAMILY PAZ domain 160 286 IPR036085 GO:0005515
Amo14g0084 312 CDD PAZ_argonaute_like 165 280 - -
Amo14g0084 312 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 9 284 - -
Amo14g0084 312 Pfam PAZ domain 169 281 IPR003100 GO:0005515
Amo14g0084 312 MobiDBLite consensus disorder prediction 36 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g0084 Amo-Chr14 964747 966317 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g0084 59 280 Eukaryotic Initiation Factors Gene Family AT5G43810 31.441 4.75e-31 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g0084 K11593 - gmx:100820376 484.182