Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g0083 ATGATAGGCACTAGCAGGCCTACACACTACCATGTTCTTCATGATGAGGTTGGTTTTAGTGCTGATGAGCTACAGGAGCTTGTACATTCTCTGTCATATGTGTATCAGAGGAGCACCACTTCCATTTCTGTTGTTGCTCCAATATGCTACGCACACTTGGCTGCAACCCAGGTGGGGCACTTCCTCAAATTTGAAGACAAATCTGAGACATCGTCAAGTCATGGTGGACTGAGTGCTGCTGGAGCTGTCCCTGTCCCCCAGTTGCCGAAATTGCAGGACGGTGTTTCCGACTCAATGTTCTTCTGCTGA 309 0.4854 MIGTSRPTHYHVLHDEVGFSADELQELVHSLSYVYQRSTTSISVVAPICYAHLAATQVGHFLKFEDKSETSSSHGGLSAAGAVPVPQLPKLQDGVSDSMFFC* 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g0083 102 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 2 101 - -
Amo14g0083 102 Pfam Piwi domain 1 62 IPR003165 GO:0003676
Amo14g0083 102 SUPERFAMILY Ribonuclease H-like 2 61 IPR012337 -
Amo14g0083 102 Gene3D - 1 102 IPR036397 GO:0003676
Amo14g0083 102 ProSiteProfiles Piwi domain profile. 1 63 IPR003165 GO:0003676
Amo14g0083 102 PANTHER TRANSLATION INITIATION FACTOR 2C, PUTATIVE-RELATED 2 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g0083 Amo-Chr14 960463 961206 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g0083 3 102 Eukaryotic Initiation Factors Gene Family AT5G43810 42.718 4.16e-22 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g0083 K11593 - csin:114306674 180.259