Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g0021 ATGGCATACCTGAAATCAAGATCCAAAAATGACATTATTAGTTTGTGTATGCTTTTGCTGTGCTTGGGTTGTGTGGAGTCCAACGATGGCGATGGTCAAGGTGCATACATGTTGAAGCTTATGAATGCACTCAAACCCCCTGCCTGGTCTAACACGAAGCCCGTGTGCGAGTGGATAGGCGTGACTTGCAACGATCAAAGTGGAAGGATTGAACAGATCGATCTCAGTTCAAAGTCGCTGACGGGAACAGTTCCTGCAGGCTTCAACGACTCCCTCTCCCACCTCACATTCCTCTATCTCGCCAACCTCACCTTCCTCCAAGAAGTGTACTTCGAAAACAACAACTTCACCTCTATCCCTCATGGTTGCTTCCATGGTCTTACTAGTTTGCAGTCCTTGACCTTGTATAACAATATCAACCTCCCACCATGGAACTTTCCTATCGATTTGACTGCTCACTCCTCCCAACTCTATAAACTCGACCTGTCTTCTACAAATCTCAAAGGCTCCTTACCACCAAACATATCCCATTCCTTCCTAGTTATGGTGTATCTTTATCTCTCTAACAACCACCTCTCCTTCATCCCTGAGGGTTGCTTCCACAACCTAACCAGTTTGGGTGGCCTCTCTTTGGCCAACAATACCAACCTCCCACCATGGACCTTCCCCAACTTGATTCAGTCCACAGAAATAGAAGAGCTCGATCTTACTGCTACAAATATCATGGGCTTTCTACCAGAAATATTTGACTCATTGACAAGTTTGAGGACTTTTGTTCTCTCCAAAAACAGCCTAACTGGTGTCTTGCCAGTGTCTTTTCGAAGGTCGAAGATTGTCACCTTGCATCTCAACAACCAGAAGGATCCCGGGTTGTCAGGTCCAATTGATGTCCTTTCAAACATGCTCAACTTGTCTCATGTGTGGCTTCAGGGGAACTCGTTTACAGGACCTATTCCTGACATGTCTCGCTGCACTGATTTAGAAGATTTACAACTTGCCCACAATCAATTAACAGGTGTGGTCCCAGATTCTCTCATCGCTCATCAATACTTGGAAGATTTTTATTTGGGCTATAACTTTTTGCAAGGTCCTCTACCAAATACTACCTTCAATAGTTTTGCTATTATGGAGAATCTCGGTGTTAACACCACAAATGGCTTCTGTCACAAAGATCCAGGACCTTGTGATCACAAAGTGACCCATTTGCTTCAAATTGCTGCGGAATTCAAGTATCCAATTTTGTTGGCACGTACATGGAAAGGAAATGATGTCTGTAAAGGTTGGCGTTTTATTACGTGTGATGACAAAAATAAGATCAGAATGGTCAATTTATCAAATCTGAAATTGACGGGCACGATCTCACCTGCATTCGCCAATTTAACTGATTTGTGGAAATTGTATTTGGATGGCAATAATTTGACGGGTGAAATTCCTCAAAGATTGACAAGTTTACATGAACTTGAGGTTGTGGATGTCTCTAACAACCATCTTGAAGGAAATATTCCCAAATTCTCACCAAGTGTAAAGTTTATTGCCACAGGCAATGATTTTCCTAATGCTTCCCACCATAGACCAAGGCGAACCTTAACTACTACTTTGATTACAGGCTTATCAGCAGCCAGTGTTGGAATTTTGGTAACATGTGCTGTGGTTATTTATGAAAGCAAGAGGTTACAGAAAATTCTGTTCAAGAAAACAATTGTTAATCACAATATTGAGGATTTGATACAAAGTCATGGGTTTATGGTGCAAAAACGATATAGTTACTCACAGGTAAAAAAGATGACCAATTCATTTTGTGAGAAACTAGGACAAGGAGGATTTGGTGTTGTATATAAAGGAAGTTTAAGTGATGGTCGTCAAGTAGTAGTGAAGATATTGAATGAATCCAAAGGTAATGGAGAAGAATTTATAAATGAGGTTGCAAGTATTAACAGAACATCTCATGTGAATATTGTCCCATTTTTAGGATTTTGTTATGAGCCAAATAAACGAGCTTTGATTTATGAATTAATGCCAAATGGTTCTTTAGACAAATTTATTGATGAAAGGGCATCGTTTAATACTGTGTGCAAATTGGACTGGAATATACTCTACCAAGTTATAATTGGCATAGCTCGTGATCTAGAATATTTACATTGGGAATGTAGCACCAAGATTTTACATCTTGATATTAAACCTCAAAATATTCTTTTGGATAGAGAATTTGTTCCTAAAATTGCTGATTTTGGATTAGCTAAAATATGCACAAAGAAAGAGAGTATTGTATCTCTACAGTGCCCAAGAGGAACTGCAGGATATATTGCACCAGAAGTATATAATCAAATGGACGGTGGAGTTTCTCGAATTTCTCACAAATCCGATGTGTATAGTTATGGGAAGTTGATTCATGTAGTAGTCGGAGGAAAAAAGAATTATAATAGTAAAGATTCTCGTGCAAGAATTCGAACAAGATAA 2457 0.3964 MAYLKSRSKNDIISLCMLLLCLGCVESNDGDGQGAYMLKLMNALKPPAWSNTKPVCEWIGVTCNDQSGRIEQIDLSSKSLTGTVPAGFNDSLSHLTFLYLANLTFLQEVYFENNNFTSIPHGCFHGLTSLQSLTLYNNINLPPWNFPIDLTAHSSQLYKLDLSSTNLKGSLPPNISHSFLVMVYLYLSNNHLSFIPEGCFHNLTSLGGLSLANNTNLPPWTFPNLIQSTEIEELDLTATNIMGFLPEIFDSLTSLRTFVLSKNSLTGVLPVSFRRSKIVTLHLNNQKDPGLSGPIDVLSNMLNLSHVWLQGNSFTGPIPDMSRCTDLEDLQLAHNQLTGVVPDSLIAHQYLEDFYLGYNFLQGPLPNTTFNSFAIMENLGVNTTNGFCHKDPGPCDHKVTHLLQIAAEFKYPILLARTWKGNDVCKGWRFITCDDKNKIRMVNLSNLKLTGTISPAFANLTDLWKLYLDGNNLTGEIPQRLTSLHELEVVDVSNNHLEGNIPKFSPSVKFIATGNDFPNASHHRPRRTLTTTLITGLSAASVGILVTCAVVIYESKRLQKILFKKTIVNHNIEDLIQSHGFMVQKRYSYSQVKKMTNSFCEKLGQGGFGVVYKGSLSDGRQVVVKILNESKGNGEEFINEVASINRTSHVNIVPFLGFCYEPNKRALIYELMPNGSLDKFIDERASFNTVCKLDWNILYQVIIGIARDLEYLHWECSTKILHLDIKPQNILLDREFVPKIADFGLAKICTKKESIVSLQCPRGTAGYIAPEVYNQMDGGVSRISHKSDVYSYGKLIHVVVGGKKNYNSKDSRARIRTR* 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g0021 818 SUPERFAMILY L domain-like 54 394 - -
Amo14g0021 818 PANTHER RECEPTOR-LIKE KINASE TMK4 184 809 - -
Amo14g0021 818 Gene3D Phosphorylase Kinase; domain 1 571 671 - -
Amo14g0021 818 SMART serkin_6 597 815 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g0021 818 ProSiteProfiles Protein kinase domain profile. 597 818 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g0021 818 Pfam Protein kinase domain 601 811 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g0021 818 ProSitePatterns Protein kinases ATP-binding region signature. 603 625 IPR017441 GO:0005524
Amo14g0021 818 SMART LRR_typ_2 103 126 IPR003591 -
Amo14g0021 818 SMART LRR_typ_2 460 484 IPR003591 -
Amo14g0021 818 SMART LRR_typ_2 203 224 IPR003591 -
Amo14g0021 818 SMART LRR_typ_2 252 275 IPR003591 -
Amo14g0021 818 SMART LRR_typ_2 179 202 IPR003591 -
Amo14g0021 818 Pfam BspA type Leucine rich repeat region (6 copies) 106 139 IPR026906 -
Amo14g0021 818 PANTHER OSJNBA0070M12.3 PROTEIN 24 192 - -
Amo14g0021 818 PANTHER OSJNBA0070M12.3 PROTEIN 184 809 - -
Amo14g0021 818 ProSitePatterns Serine/Threonine protein kinases active-site signature. 720 732 IPR008271 GO:0004672|GO:0006468
Amo14g0021 818 Pfam Leucine rich repeat N-terminal domain 401 434 IPR013210 -
Amo14g0021 818 Pfam Leucine rich repeat N-terminal domain 33 64 IPR013210 -
Amo14g0021 818 Pfam Leucine rich repeat 156 214 IPR001611 GO:0005515
Amo14g0021 818 Gene3D Ribonuclease Inhibitor 397 517 IPR032675 -
Amo14g0021 818 Gene3D Ribonuclease Inhibitor 35 150 IPR032675 -
Amo14g0021 818 Gene3D Transferase(Phosphotransferase) domain 1 672 817 - -
Amo14g0021 818 PANTHER RECEPTOR-LIKE KINASE TMK4 24 192 - -
Amo14g0021 818 Gene3D Ribonuclease Inhibitor 152 385 IPR032675 -
Amo14g0021 818 SUPERFAMILY Protein kinase-like (PK-like) 575 811 IPR011009 -
Amo14g0021 818 SUPERFAMILY L domain-like 401 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g0021 Amo-Chr14 318317 322436 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g0021 524 804 Receptor kinase-like Gene Family AT4G18250 51.943 2.81e-85 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Amo14g0021 Pkinase 2.6e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g0021 - - aip:107637472 937.947