Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g0008 ATGTCCAGCTCATCGGAGTATTCTGGAGTTTCCGGCCAAAATCCGGTCAAGTCGCCGGAGATCTCCACGTTTTCCCAGACTTGTAATCGGTTGAGCCAATACCTCAGAGAAAACGGTTCCTTCGGTGACCTCACCCTCGGCATAACAAAACGCAACCCCGCCCCTGAAACACACGGGTCACCTGAGAACTCATGCTATTCTGCAACAACCATGGAGTTATTTCCCACAAAGGAGAACAATAATGTGACAACCATGGATCTTCTTTATCCACGTGCTCCTGCTTATGCAAACACAAGTGCATTAAAGGATGGTAAAGGTGCACAATTAACAATCTTTTATGGTGGACAAGTGATGGTGTTTGATGACATTCCTGCTGAGAAAGCGGAGGAGATTCTGTCCTTGGCTAAAAGAGGGAACTCTTGTGCATGCGCTTCTACTCAGCACACCCGGCCTTACTTGTTTCAACCCCACTCCCAGCTACAGTCCGCACCTGTTGTTGGTGATCTACCTATTGCAAGGAAGGCTTCGCTGCATCGCTTCCTGGAGAAGAGAAAGGATAGAATTGCTTCAAAAGCACCATATCAAAGCAGCAGCCCCGTCTCGGTCCCTAATAAAGCAGCTGAGTCGTCTATGGCATGGCTTGGGTTAGGAGCTTAA 657 0.484 MSSSSEYSGVSGQNPVKSPEISTFSQTCNRLSQYLRENGSFGDLTLGITKRNPAPETHGSPENSCYSATTMELFPTKENNNVTTMDLLYPRAPAYANTSALKDGKGAQLTIFYGGQVMVFDDIPAEKAEEILSLAKRGNSCACASTQHTRPYLFQPHSQLQSAPVVGDLPIARKASLHRFLEKRKDRIASKAPYQSSSPVSVPNKAAESSMAWLGLGA* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g0008 218 ProSiteProfiles Tify domain profile. 102 137 IPR010399 -
Amo14g0008 218 Pfam tify domain 106 135 IPR010399 -
Amo14g0008 218 SMART tify_2 102 137 IPR010399 -
Amo14g0008 218 Pfam Jas motif 170 195 IPR018467 -
Amo14g0008 218 MobiDBLite consensus disorder prediction 1 22 - -
Amo14g0008 218 PANTHER PROTEIN TIFY 10A 20 217 - -
Amo14g0008 218 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 20 217 IPR040390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g0008 Amo-Chr14 197734 199363 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g0008 1 218 Tify Gene Family AT1G19180 41.634 1.68e-48 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Amo14g0008 tify 9.6e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g0008 K13464 - gmx:100527510 231.106