Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Amo14g0002 | ATGCAAACACATAACAGAAATTACCATTTTATCCTCCTGCTCATCTTGTTTGTGTCGTCGTTCTCGGCGACGGCGCAAGATCTGCTCCGTTCATCGTGCAGCCACGCAAGGTACCCCGCGCTCTGCATCAAAACCCTATCTCCATACGCCACTGGTTCCGCCACCCCCATGGATCTGGCTCAAGCCGCTGTTAGGGTTAGCCTGGCTCGCTCTCGCTCACTCTCCACATATGTTACCACTCTTCAGTCTCAGATGCAGCAACAGGCGCCGCCTTCCACCGACCGAGCCGCTCTCAAGGACTGCGTGCTTCAGATCGCCGACTCCGTGGATGAGTTGACTCGGACGCTGAGCGAGTTGAAGAACATGCGGGTGGGCACGGCGTCGTTCCAGTGGCACCTCAGTAACGCGCGGACGTGGACTAGCACGTCCTTGACCAACTGTTACTCTTGCGTCAGCGGATTTGGCGGCAGCGACGGCAAGGTTGGGTTGGACGTGAAGCAGAGAGTGAACAGCGTAGGAATGCTCACCAGCAACGCGCTTTACCTCATCACGCGAATCGGTGGTGCTGATAATGGCGTTGGTGGAGGAAACTGA | 594 | 0.5673 | MQTHNRNYHFILLLILFVSSFSATAQDLLRSSCSHARYPALCIKTLSPYATGSATPMDLAQAAVRVSLARSRSLSTYVTTLQSQMQQQAPPSTDRAALKDCVLQIADSVDELTRTLSELKNMRVGTASFQWHLSNARTWTSTSLTNCYSCVSGFGGSDGKVGLDVKQRVNSVGMLTSNALYLITRIGGADNGVGGGN* | 198 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Amo14g0002 | 197 | SUPERFAMILY | Plant invertase/pectin methylesterase inhibitor | 26 | 186 | IPR035513 | - | |
| Amo14g0002 | 197 | PANTHER | PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR | 9 | 190 | - | - | |
| Amo14g0002 | 197 | CDD | PMEI-like_3 | 31 | 186 | - | - | |
| Amo14g0002 | 197 | PANTHER | PECTINESTERASE INHIBITOR-LIKE | 9 | 190 | - | - | |
| Amo14g0002 | 197 | SMART | PMEI_2 | 24 | 182 | IPR006501 | GO:0004857 | |
| Amo14g0002 | 197 | TIGRFAM | PME_inhib: pectinesterase inhibitor domain | 9 | 184 | IPR006501 | GO:0004857 | |
| Amo14g0002 | 197 | Gene3D | Invertase/pectin methylesterase inhibitor family protein | 23 | 186 | IPR035513 | - | |
| Amo14g0002 | 197 | Pfam | Plant invertase/pectin methylesterase inhibitor | 28 | 181 | IPR006501 | GO:0004857 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Amo14g0002 | Amo-Chr14 | 20406 | 21220 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Amo14g0002 | 20 | 190 | Carbohydrate Esterase | AT3G14310 | 26.286 | 5.60e-12 | 62.0 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Amo14g0002 | - | - | adu:107496239 | 343.199 |