Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g5813 ATGTGCACTTCACAGGGTGTTATTACATGCAAAGCTGCAGTGTGCTGGGGATTAGGAATGACAGTAAAGCTTGAAGAGATTCAAGTTGATCCGCGGAAATCAGGCGAAGTTAGAGTTAAGATGCTTTGTGCTAGCATCTGCCACACTGATGTTTTAGGCATTCAAGGATCTCCATATGTTAATGGTTTCCCTCTAGTACCTGGACATGAAGGAACAGTTGGAGATGAAGTAAAAAATCTTAAAGAAAGGGATATGGTGATTCCAACATATATAGGAGAGTGTGGACATTGCCGGAGTTGTGTTTCCGGAAAGACCAACCTTTGCCTGACATACGCTTTCAGAGTTACTGGCTTGATGCCAGATAACACTTCAAGAATGTCCTGCAGAGGCAAGAAGTTACAACCCACTTGGACTTGTGCAACGTGGTCGGAGTACACGGTTGTCAATGCCAATTACCTTCTCAAGGTTGATCCAGGCATCAATCTAGCCCATGCTAGCTTCATCTCATGTGGGTTTTCAACTGGCTATGGAGCTGCTGGAAGGAAGCCCAAGTTGAAAGTGGATCAAGAACTGAGTGATGGATTTGGTGTGGATTATTCTTTTGAGTGCACTGGAGTTGCTTCTTTGATTAGTGAATCCTTAGCAGCCACAAAGATGGGAACCGGTAAAGCAATAACGATTGGCGCGCCAAATGAACCTATTGTGCCTTTCAATCATACAGCAATTCTGGCTGACAGAACTCAGAAGGGTTCTGTTTTTTGGAGGTCTAAAAGCCATGAGTTCCCTCTTCAAAAGCTATTCACCCATGAGTTCCCATTGACAGATATAAGCAAAGCATTTGATCTATTCAAAGAGCCAAATTGTGTCAAAACACTACCATGTGATCTTTGTTTCGCCCTTGTCTCAAAGTAG 912 0.4342 MCTSQGVITCKAAVCWGLGMTVKLEEIQVDPRKSGEVRVKMLCASICHTDVLGIQGSPYVNGFPLVPGHEGTVGDEVKNLKERDMVIPTYIGECGHCRSCVSGKTNLCLTYAFRVTGLMPDNTSRMSCRGKKLQPTWTCATWSEYTVVNANYLLKVDPGINLAHASFISCGFSTGYGAAGRKPKLKVDQELSDGFGVDYSFECTGVASLISESLAATKMGTGKAITIGAPNEPIVPFNHTAILADRTQKGSVFWRSKSHEFPLQKLFTHEFPLTDISKAFDLFKEPNCVKTLPCDLCFALVSK* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g5813 303 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 184 261 IPR036291 -
Amo13g5813 303 Gene3D - 252 290 - -
Amo13g5813 303 Gene3D - 187 251 - -
Amo13g5813 303 PANTHER ALCOHOL DEHYDROGENASE 5 185 - -
Amo13g5813 303 PANTHER ALCOHOL DEHYDROGENASE 189 292 - -
Amo13g5813 303 PANTHER ALCOHOL DEHYDROGENASE-RELATED 5 185 - -
Amo13g5813 303 PANTHER ALCOHOL DEHYDROGENASE-RELATED 189 292 - -
Amo13g5813 303 Gene3D - 175 185 - -
Amo13g5813 303 Pfam Alcohol dehydrogenase GroES-like domain 35 156 IPR013154 -
Amo13g5813 303 Gene3D - 14 174 - -
Amo13g5813 303 SUPERFAMILY GroES-like 4 196 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g5813 Amo-Chr13 160416253 160425325 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g5813 32 160 Monolignol Biosynthesis Gene Families AT2G21730 29.927 1.40e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g5813 K00121 - gmx:100798341 332.798