Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g5812 ATGGCTTTCCGCATTCCAGGTATTAGAAAGGCATCACTTTCTGCATCTAAAGGGACTAATATTCCAAAAGGCTATCTTGCAGTCTATGTTGGAGATAAGATGAGTCGGTTTGTGATTCCTGTATGTTACTTGAACCAGCCTTCGTTTCAAGAATTATTAAGCCAAGCAGAAGAAGAATTCGGATATGAACATCCAACCGGTGGTCTTACAATTCCATGCAGTGAGGATGAATTCCTAAACCTCACTTCTCAATTGGTTGGCCAGTAG 267 0.412 MAFRIPGIRKASLSASKGTNIPKGYLAVYVGDKMSRFVIPVCYLNQPSFQELLSQAEEEFGYEHPTGGLTIPCSEDEFLNLTSQLVGQ* 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g5812 88 Pfam Auxin responsive protein 12 83 IPR003676 GO:0009733
Amo13g5812 88 PANTHER AUXIN-INDUCED PROTEIN 10A5 12 86 - -
Amo13g5812 88 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 12 86 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g5812 Amo-Chr13 160411562 160411828 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g5812 20 78 Calmodulin-binding Proteins AT3G43120 52.542 1.60e-17 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g5812 K14488 - gmx:100782363 142.124