Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g5796 ATGTCTCTCCCCAAAACCCTACTTTCCCTCCTCCTTCTTTTTGTCACCATCGCCGCCGTTACCGCCGATGACTCAGCCGTCATGTCCAAACTCCTGAAATCCCTGACCTCCCCGCCCACCGACTGGTCCCCCAATACCCCTTACTGCCAATGGACTGGCATTACCTGCGACTCCTCCAACCGCGTCACCAAAATAACACTCTCCTCTAAGTCCCTCACCGGAACTCTCCCCTCCGATCTAAACTCCCTCTCTCAGCTCACTGACCTATATCTTCAAGAAAACTCCCTCTCCGGCCCACTCCCTTCTCTGTCCGACCTCTCTAACCTCCAAACTGCCTACTTCGGCCGCAACAACTTCACCTCCGTCCCCTCCGCCGCATTCTCCGGCCTCACCAGCCTCCAGAAACTCAGCCTCTTCAACAACCCTTCCCTCTCCCCCTGGCCCTTCCCCACCGACTTAACTCAATCATCAACCCTCAGCGACCTCGATTTCGGTTCCGCCGGAATCACCGGCGACCTTCCGGACATCTTTGACTCCTTCCCCAGTCTCCAGAACCTTCGCCTCTCCTACAACAACCTCACCGGAGCCTTGCCCAAGTCCCTCGCCTCCTCCTCGATTATCAACCTGTGGCTTAACAACCAGCAAAACGGTTTATCGGGGACAATTGAGGTTCTCTCCAACATGACGCAGTTGGCTCAGTTGTGGCTCCACAAGAACCAGTTCACCGGTGGGATCCCTGATTTGTCGAAATGCGATAGCCTCTTTGATTTGCAGCTTAGGGATAACAAGCTAACCGGGGTCGTTCCGAGCTCATTGATGGCGCTTCCGAGCTTGAAGAACGTATCTTTGGACAACAATGAGTTGCAGGGTCCTGTGCCGGTGTTCGGTAAGGGTGTGCAGGTTACTCTTGATGGGATCAATAGTTTTTGTAGAGATACTCCTGGACCTTGTGATGATAAGGTGATGGTTTTGCTTAAGGTTGCTGAGGGTTTTGGGTATCCCAGTCGGTTTGCGGAGTCGTGGAAAGGGAATGATCCTTGCAGTGGTTGGAGTTTTGTGGTTTGTTCAGGGGAGAAGATTACTACTTTGAATTTTAAGAATCTGGGTTTGCAGGGGATTATTTCACCTGCATTTGCGAATTTGACTGATTTGAGGAGCTTGTACCTCAGCGGGAACAATTTGACTGGTTCTATACCCGAGAGCTTGACCACATTGCCCCAACTTGAGACTCTTGATGTTTCTAATAACAATCTGTTTGGGGAGGTTCCAAAATTCCCTCCAAGGGTGAAGTTATTAACTTCTGGTAATGCTATGCTTGGGAAGAATCCTGGTCCTGGGGGAGGTGGAGGAGGGAGCAGAACTAGTCCTTCTGAGGGGTCTGGTCCGAGTGCAAGTCCGGTTGAACCCAGGAAAGGTAGTTCCTTGCCGCCGGGTTGGATTGCTGGTATAGTGGTTTTTGTTTTACTTTTTGTTTTTGTGGTGGTCTTTGTATCCTGGAAGTGTTATGTCAGAAATCGGCACCGGAAGTTTGGAAGGGTTGGTATTCCTCAGAATGGAAAAGGAAACTTTAAACTTGATACGGCAAGTGTTTCCAATTCCAATGGATATGGTGGTGTGCCAAGTGATTTGCAAAGCCAGAGCAGTGGTGATAGGAGTGATCTTAATGGTTTTGATGGTGGAAATGCCTTGATTTCAATCCATGTTCTTCGGCAAGTAACCAATAATTTCAGTGAAGAGAACATTTTAGGTAGAGGAGGATTTGGTGTTGTTTATAAAGGGGAGTTGCCTGATGGAACAAAAATTGCTGTCAAGAGGATGGAATCTGTGGCAATGGGAAACAAAGGAATGAATGAGTTCCAAGCTGAGATTGCAGTTCTTAGTAAAGTTAGGCATAGACATCTGGTCGCTCTTTTGGGATATTGTATCAATGGCAATGAGAGGATTTTGGTATATGAGTACATGCCTCAAGGAACATTAACTCAGCATCTCTTTGAGTGGCGTGAACTTGGGTGTGCTCCCTTGACATGGAAACAAAGGGTAGCAATAGCTTTGGATGTAGCACGGGGTGTGGAATACTTGCACAGCTTAGCTCAGCAAAGCTTCATTCACAGAGATTTAAAACCCTCAAACATACTATTAGGTGATGACATGAGAGCAAAGGTTGCAGATTTTGGGTTGGTTCGGCTTGCACCGGATGGGAAGTACTCTGTCGAGACACGGCTGGCTGGAACATTTGGGTATCTTGCTCCTGAGTATGCAGCTACTGGAAGAGTGACAACCAAAGTGGATGTTTATGCATTTGGAGTAGTTTTGATGGAACTTATCACCGGTAGAAGGGCATTGGATGATACTTTGCCTGATGAAAGGTCTCACTTGGTTACATGGTTCCGAAGGGTACTTATTAACAAGGAAAACATACCAAAGGCAATCGATCAAACTCTTGAACCCGATGAGGAAACCATGGAGAGCATATATAAAGTGGCCGAGCTGGCGGGCCATTGCACAGCCCGTGAACCATACCAAAGGCCGGATATGGGGCATGCAGTGAATGTCTTGGTTCCACTTGTCGAGCAATGGAAACCAACCAGGAATGCTGAAGAAGACAATGGTGGCATTGACCTTCAGATGAGTCTTCCTCAAGCTCTGCAAAGATGGCAAGCCAATGAAGGCACTTCTACAATGTTTGATATGTCATACTCACAAACCCAATCAAGCATTCCCTCTAAACCTTCTGGCTTTGCAGATTCCTTCGATTCAATGGATTGCCGGTGA 2772 0.4802 MSLPKTLLSLLLLFVTIAAVTADDSAVMSKLLKSLTSPPTDWSPNTPYCQWTGITCDSSNRVTKITLSSKSLTGTLPSDLNSLSQLTDLYLQENSLSGPLPSLSDLSNLQTAYFGRNNFTSVPSAAFSGLTSLQKLSLFNNPSLSPWPFPTDLTQSSTLSDLDFGSAGITGDLPDIFDSFPSLQNLRLSYNNLTGALPKSLASSSIINLWLNNQQNGLSGTIEVLSNMTQLAQLWLHKNQFTGGIPDLSKCDSLFDLQLRDNKLTGVVPSSLMALPSLKNVSLDNNELQGPVPVFGKGVQVTLDGINSFCRDTPGPCDDKVMVLLKVAEGFGYPSRFAESWKGNDPCSGWSFVVCSGEKITTLNFKNLGLQGIISPAFANLTDLRSLYLSGNNLTGSIPESLTTLPQLETLDVSNNNLFGEVPKFPPRVKLLTSGNAMLGKNPGPGGGGGGSRTSPSEGSGPSASPVEPRKGSSLPPGWIAGIVVFVLLFVFVVVFVSWKCYVRNRHRKFGRVGIPQNGKGNFKLDTASVSNSNGYGGVPSDLQSQSSGDRSDLNGFDGGNALISIHVLRQVTNNFSEENILGRGGFGVVYKGELPDGTKIAVKRMESVAMGNKGMNEFQAEIAVLSKVRHRHLVALLGYCINGNERILVYEYMPQGTLTQHLFEWRELGCAPLTWKQRVAIALDVARGVEYLHSLAQQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPDGKYSVETRLAGTFGYLAPEYAATGRVTTKVDVYAFGVVLMELITGRRALDDTLPDERSHLVTWFRRVLINKENIPKAIDQTLEPDEETMESIYKVAELAGHCTAREPYQRPDMGHAVNVLVPLVEQWKPTRNAEEDNGGIDLQMSLPQALQRWQANEGTSTMFDMSYSQTQSSIPSKPSGFADSFDSMDCR* 924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g5796 923 Gene3D Ribonuclease Inhibitor 22 314 IPR032675 -
Amo13g5796 923 PANTHER OSJNBA0070M12.3 PROTEIN 3 923 - -
Amo13g5796 923 ProSitePatterns Serine/Threonine protein kinases active-site signature. 701 713 IPR008271 GO:0004672|GO:0006468
Amo13g5796 923 SMART serkin_6 576 856 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g5796 923 ProSiteProfiles Protein kinase domain profile. 576 856 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g5796 923 SUPERFAMILY L domain-like 31 427 - -
Amo13g5796 923 MobiDBLite consensus disorder prediction 436 472 - -
Amo13g5796 923 Pfam Leucine rich repeat 361 418 IPR001611 GO:0005515
Amo13g5796 923 SUPERFAMILY Protein kinase-like (PK-like) 559 852 IPR011009 -
Amo13g5796 923 Gene3D Ribonuclease Inhibitor 319 442 IPR032675 -
Amo13g5796 923 Gene3D Transferase(Phosphotransferase) domain 1 654 876 - -
Amo13g5796 923 Gene3D Phosphorylase Kinase; domain 1 541 653 - -
Amo13g5796 923 CDD STKc_IRAK 582 855 - -
Amo13g5796 923 SMART LRR_typ_2 180 203 IPR003591 -
Amo13g5796 923 SMART LRR_typ_2 106 129 IPR003591 -
Amo13g5796 923 SMART LRR_typ_2 381 405 IPR003591 -
Amo13g5796 923 Pfam Protein tyrosine and serine/threonine kinase 579 850 IPR001245 GO:0004672|GO:0006468
Amo13g5796 923 MobiDBLite consensus disorder prediction 899 923 - -
Amo13g5796 923 ProSiteProfiles Leucine-rich repeat profile. 383 406 IPR001611 GO:0005515
Amo13g5796 923 Pfam Leucine rich repeat N-terminal domain 23 57 IPR013210 -
Amo13g5796 923 Pfam Leucine rich repeat N-terminal domain 323 356 IPR013210 -
Amo13g5796 923 PANTHER RECEPTOR PROTEIN KINASE TMK1-RELATED 3 923 - -
Amo13g5796 923 ProSitePatterns Protein kinases ATP-binding region signature. 582 604 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g5796 Amo-Chr13 160257674 160261420 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g5796 30 873 Receptor kinase-like Gene Family AT1G55610 30.149 1.55e-91 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Amo13g5796 PK_Tyr_Ser-Thr 3.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g5796 - - gmx:100286794 1361.28