Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g5777 ATGGCACCAAACAAGAGAGGATCATCAAGCGATGAGGGTAATGATGACAGAGACCTTCAACTCCCTCTTTGTAAACGAAAAGCAGCACTACCAGACAGCCGTATTTCTGCTTCCGGTAGTGGTTCCACCAATGACATGGCGTTGATCTTGGAACCTGTAATTCGGAAAGTGTTACAGGAGATGATGCCACCTATGCTAGAACAGGTGATGCCACGTATGTTAGAACAGGTGATTCCACCTATACTGCAGCGTTACCTACCTTCCCCATGTGATGGATTATCGGTCAGGGGGCAGATTAGTCCAGCAGCAGGTAGAGGCAGATCATTGCAGTTATGTCTGATGAAAGGGTTGCCTGCAACCATTTTCACACAGATCAACATCACAGCAGAGGACAGTTCCCCGCTCCAGGTTGCGGTGTGTGATGCAACAATTCAGAACAGCAAGGTAACAAAGGGAGATGGTCCCTCCTTGAAGGTCCAGCTGTGTGTCCTGAAGGCTGATTTTGAAAGTGAGGATTGGACTGCTGAGGAATTCAATAGCAACATAGAAAGTCCAAGAGAAGGAAAAGGACCATTACTCAAGGGAGACACGGTTATTACCATGGAAAATGGAGTTGGCTTCTTCAAGAATGTTGAGTTTACTGATAACTCTTGCTGGACAAGAAGCGGCAAGTTCCGGCTTGGAATTAAGGTACTGTCATCGAATTCAGACATCAAGGAAGCAAGAAGCGAGCGTATAAGGGTGAAGGATAAGCGAGGAGTGGCAAATGAGAAACCGGATCGTCCTTCGTTGGATGACAAGGTGAGTTGTCTGCGTAAGATAGCGAAAAATGGTCCGATCCGCAAGCAGTTGTCCTCCAATGGAATCAAAACTGTCAAGGATCTGTTGCGCTTGCTCACAACTGACCAAGCTTCACTAAAACAGAAAACCGGCAACATTCCGGGGAAGTCATGGGAGAAGATTATTGAGCATGCCAAGTCTTGTGCCATAGATAATGATGAGCGCTACATCTATCAATATTTCGCAGGAACAGCAGAGCAACCAATAGCAGCATCCCTTGTCTTAAATTGCATCTATGAGCCTGTGGCGATTTCATTTGATGGCCAAAATTTTTGCAGCCTAGAGTCTTTGAATTCGGAAGGCAAGCGTTGGGTGGAAACTGTAAAGCGGCAAGCATACAAGAACTTGAAGGATTTGAAGCCATTTGGCGCAAGTTCAGCGGGTCAATCTCTGGAAAACTTCGATTTCCCAGTTTCTCATCAGCAAGGGCAAGCACAAATGGTTCAAGCATCGGCATCGACAGCATCAGGCGCACAGAGTGTTAACGAGCAAGTAGGGTGTTCCAGTCAACATCAGGTGGGACGGGAAGAGTTCGTTGGCGATAGCGGATGGAGCAACATCAACATGGTTGATCCCTTTCCAAATTACTCGGACCCAGTTTACCCCTTTTACTATGTTGGAGGTGATTATGGGGCAACATCATCCAACGATTCATTCCCTGTCTTTGATATGCATTGGTCAAGCAAAGGTGGGTGCAACACTGTGTGGGCTAAAATCCGAACTGCTGTCATTCGTAATGTTCTTAAATGGACCATTCTCTATGCCGCCAAAAGGAAGCCCAAGCTTCTTGTTCCCTATCAGTAA 1644 0.4653 MAPNKRGSSSDEGNDDRDLQLPLCKRKAALPDSRISASGSGSTNDMALILEPVIRKVLQEMMPPMLEQVMPRMLEQVIPPILQRYLPSPCDGLSVRGQISPAAGRGRSLQLCLMKGLPATIFTQINITAEDSSPLQVAVCDATIQNSKVTKGDGPSLKVQLCVLKADFESEDWTAEEFNSNIESPREGKGPLLKGDTVITMENGVGFFKNVEFTDNSCWTRSGKFRLGIKVLSSNSDIKEARSERIRVKDKRGVANEKPDRPSLDDKVSCLRKIAKNGPIRKQLSSNGIKTVKDLLRLLTTDQASLKQKTGNIPGKSWEKIIEHAKSCAIDNDERYIYQYFAGTAEQPIAASLVLNCIYEPVAISFDGQNFCSLESLNSEGKRWVETVKRQAYKNLKDLKPFGASSAGQSLENFDFPVSHQQGQAQMVQASASTASGAQSVNEQVGCSSQHQVGREEFVGDSGWSNINMVDPFPNYSDPVYPFYYVGGDYGATSSNDSFPVFDMHWSSKGGCNTVWAKIRTAVIRNVLKWTILYAAKRKPKLLVPYQ* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g5777 547 Pfam Calmodulin binding protein C-terminal domain 352 401 IPR046829 -
Amo13g5777 547 PANTHER CALMODULIN-BINDING PROTEIN 60 G 25 538 - -
Amo13g5777 547 Pfam Calmodulin binding protein central domain 263 328 IPR046830 -
Amo13g5777 547 Pfam Calmodulin binding protein-like N-terminal domain 109 251 IPR046831 -
Amo13g5777 547 PANTHER OS02G0177800 PROTEIN 25 538 IPR012416 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g5777 Amo-Chr13 159915487 159918218 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g5777 48 444 Calmodulin-binding Proteins AT5G26920 35.062 8.71e-62 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g5777 - - aip:107645943 993.416