Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g5763 ATGGAGTGCAGGAGCATCCAAAGCATGGCATCAAGCAGCACAAGACCCAAATATGACGTGTTTGTGAGCTTCAGAGGTGAGGACGTACGCAACACCTTCGCTGATCATCTATTTGCAGCTTTCCGTAGAAACGGAATAGTTGCATTCAGGGACGATAGGAATCTGTTGCAAGGACAGCACATCTCCACTGAGCTGGTGCAAGCAATTGAAGGATCTCAGGTTCTCATTGTCATCTTCTCTAAAAACTATGCTACCTCTTCATGGTGCTTGCAGGAACTCGCTAAGATGCTTGATTGCAGCAATACGATAACAGAACCAAATCTGTTGCCTATTTTCTACGATGTGACTCCGTCTGAGGTGCGTAAACAGACCGGAAACTATGGGAAAGCCTTGGCTGAGCATGAAGAAAGATTCAAAGATAACTCAAACATGGTGCAACAGTGGAGGGAATCTCTGCTGCAAGTGGCCAATCTCTCTGGTTGGGATATACAAAATAAGCAGGAGAATGGAGAGATTGAAAAAATTGTTAAAAGGGTAAGAAGCAAACTAGGTTGCAATTTGTCAAGTGTGGATGGGTTGGTTGGGATGCAATCTCGTGTGGAACAATTGGAAAACCTGATTGATTTCAACTCCGATAATGAAGTTCGGGTTGTAGGCGTTTGTGGCATGGGTGGGATAGGAAAGTCAACACTTGCTAGGGTGGTGTATGGTAGAAACCTTCATAAATTTGGTGCTCATTGTTTTGTTGACGATATAAGCAAAGTTTTTCGTGGAGTTGGTCTACTTTCTCTACAAAAGCAACTTGTTTGTCAAATTACAAATGGAGAGATCCAAGATATATACAATCATTACGAGGCTAATAGTTTGATAAAAACTATGCTACGCTGTCAAAAGGCTCTGATTGTTCTAGATAATGCTGATGATGTTGAACAGTTAGAGAACCTTGGCGTGACTCGTGATTGTCTATATCCAGGAAGCAGAATTGTAGTAACTTCTAGAGATCAACATGTCTTGAACTCTTTTGGGCTAGATCAAACATACAAAGTTCAACTCTTGAATGAGGATGAAGCTCATCAATTGTTCTGTGAAAAAGCTTTTAATGATAATATAATTATAAGTTGTGACGAGATTAGCAGAGAGTACAAAAAGTTGACGGATCTTGCACTTGAATATGCTCAAGGCCTTCCCTTGGCGATCAAAGTTTTGGGGTCATATCTACGCGGTCGAGATATCTCTGTATGGAGAAGTGCCTTAGATAGACTGAAAAATAATCCAAAGAAGGAAATCGCAGATGTGCTTCAACTTAGTTTTGATGGATTGGAACCCATGGAAAAGGAAATATTTTTGGACATTGCTTGTTTCTTTAACCACGAATATAAATTGTCTGTGGAAGACATGTTGTACTGTCGTGGTCTTCATCCAAAGATTGGAATAAGTGTACTCATCGATAAATCATTAATAACAATTGATGGAGACTATATTAGAATGCATGACCTGTTGCAAGAGTTAGGCATGAGAATAGTTCGGCAAAGTGCTCCAAATGAGCCATGGAAGTGGAGTAGGATATGGTGCAAAGAGGATTTTCAACGTATTATGTTTGGAAATACGGTAATTGATGATGTTAAGGCCGTTCAATTGAGGGGATTATATGATGAAGAAAGAAATATGACATTAAGAGCAGAAACATTATCAAGAATGAAACGACTTGAATTTCTCGAAATAAAAAGTGTTAGTTTTTCTGGAAGTTTTAATAGCATTTCTAGCGAATTGCGATATCTCGAGTGGGAAGAATATCCGTTTACGTATTTTCCATCATGTTGTAAGCTATCCAAGCTTGTGAAATTAGTCTTGCAAAAGAGCAACATCAAGCAACTATGGGATGGCACAATGTGTCCGGACAATTTGAAGGAATTGGATCTCTCTGACTCCAAAAATCTTGTGAAGACTCCAAACCTTAGCCAGGCTCCAAATCTTGAGGTGCTGATCCTTAGAGAATGTAGAAAGCTTAAGCACATACATCCATCAACTGGAGACCTAAGAAAACTTGTTGAGTTAGATTTGAGTGAGTGCACAAGTTTAATGAGCTTCCCCATCACTGTATTCGGTATATCTTCACTAAAATATGTTAATCTGAGCGGGTGCTCAAGATTATTTAGTGGGAAAGAGCTGGAAAATGGAAGTGAGAGTGGTATCCAATGCCAATCGACAGTATGGTCCACTTTTAAAAGGCTTAAGCTTAGGTTACCATTCCATTTCTTCAATTCTTCTAAAAGTAGATACAACCATGTGTTCCGTCTGTGGAGGCTTTCTGTGGCTCGCTTAAGCTGCGTGTATTCTCTTGACCTAAGTTATTGTAATCTGCATACTATCCCTGAGGCCATATCATCCTTACATTATTTAGAGATCTTAGATTTCAGGGGAAACAATATAGTTAGAGTACCTGATTTCATAAACAAGCTTCCCAGACTGATAGTGTTGAAGTTAGATAACTGCAAACGGCTAATGTATGTAGATGAGTTCCCGTTGCCATTCCCCTATCCAGCGGTAGAGCGAACAAAACTTGTGAAATGGGGAGAATTGAGGATGTGGAACTGCCCGAAAATAGTAGAGAAGGAAAGGCTGAGTGGAATGGGTAGTTCATGGATGAGAGAGTACATTAAGGTACACAATGAATCCCTTGGTAGACTTGCTATTGTAATTCCAGGGAGTGGAGTTCCAATTCCAAGGTGGTTTAAGCATCAGAATAAGGGGGCAGATAATTCAATGTGGATAGAATCATTTCCGAATGCCAATGACAATGATTGGATTGGCATTGCCCTTTGTGCCGAGATTCTTGTTCAGTTTGCACCACCCGTTGCCATTGAGCTCTACTTTTACGACCAAACAGAAAAAGTCAATCTCAAGCACCTTGTTTGTCTTGAAAAGGAGGAGGAGGTGAGGGGTGAATTGGTTCACCTCTGCCTATTCTATTTTTCTCGCCAACTACTCATTCGGGATGGAAAGCAGCATGATCTTGATGGATCCCGCTTTGAATTCAAAGAATTTAACCACCGCTATGTGGAAGTGAAGAAGTGGGGAATGCGTGTGGTACTGAACCAGGATTTGGAGTAA 3111 0.405 MECRSIQSMASSSTRPKYDVFVSFRGEDVRNTFADHLFAAFRRNGIVAFRDDRNLLQGQHISTELVQAIEGSQVLIVIFSKNYATSSWCLQELAKMLDCSNTITEPNLLPIFYDVTPSEVRKQTGNYGKALAEHEERFKDNSNMVQQWRESLLQVANLSGWDIQNKQENGEIEKIVKRVRSKLGCNLSSVDGLVGMQSRVEQLENLIDFNSDNEVRVVGVCGMGGIGKSTLARVVYGRNLHKFGAHCFVDDISKVFRGVGLLSLQKQLVCQITNGEIQDIYNHYEANSLIKTMLRCQKALIVLDNADDVEQLENLGVTRDCLYPGSRIVVTSRDQHVLNSFGLDQTYKVQLLNEDEAHQLFCEKAFNDNIIISCDEISREYKKLTDLALEYAQGLPLAIKVLGSYLRGRDISVWRSALDRLKNNPKKEIADVLQLSFDGLEPMEKEIFLDIACFFNHEYKLSVEDMLYCRGLHPKIGISVLIDKSLITIDGDYIRMHDLLQELGMRIVRQSAPNEPWKWSRIWCKEDFQRIMFGNTVIDDVKAVQLRGLYDEERNMTLRAETLSRMKRLEFLEIKSVSFSGSFNSISSELRYLEWEEYPFTYFPSCCKLSKLVKLVLQKSNIKQLWDGTMCPDNLKELDLSDSKNLVKTPNLSQAPNLEVLILRECRKLKHIHPSTGDLRKLVELDLSECTSLMSFPITVFGISSLKYVNLSGCSRLFSGKELENGSESGIQCQSTVWSTFKRLKLRLPFHFFNSSKSRYNHVFRLWRLSVARLSCVYSLDLSYCNLHTIPEAISSLHYLEILDFRGNNIVRVPDFINKLPRLIVLKLDNCKRLMYVDEFPLPFPYPAVERTKLVKWGELRMWNCPKIVEKERLSGMGSSWMREYIKVHNESLGRLAIVIPGSGVPIPRWFKHQNKGADNSMWIESFPNANDNDWIGIALCAEILVQFAPPVAIELYFYDQTEKVNLKHLVCLEKEEEVRGELVHLCLFYFSRQLLIRDGKQHDLDGSRFEFKEFNHRYVEVKKWGMRVVLNQDLE* 1037
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g5763 1036 Gene3D - 351 441 IPR042197 -
Amo13g5763 1036 SUPERFAMILY "Winged helix" DNA-binding domain 428 528 IPR036390 -
Amo13g5763 1036 Gene3D - 189 349 IPR027417 -
Amo13g5763 1036 PRINTS Disease resistance protein signature 677 693 - -
Amo13g5763 1036 PRINTS Disease resistance protein signature 217 232 - -
Amo13g5763 1036 PRINTS Disease resistance protein signature 392 406 - -
Amo13g5763 1036 PRINTS Disease resistance protein signature 293 307 - -
Amo13g5763 1036 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 854 IPR044974 GO:0006952
Amo13g5763 1036 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 12 854 - -
Amo13g5763 1036 SMART till_3 17 158 IPR000157 GO:0007165
Amo13g5763 1036 Gene3D Ribonuclease Inhibitor 738 879 IPR032675 -
Amo13g5763 1036 Gene3D Ribonuclease Inhibitor 544 728 IPR032675 -
Amo13g5763 1036 Pfam NB-ARC domain 199 427 IPR002182 GO:0043531
Amo13g5763 1036 ProSiteProfiles TIR domain profile. 16 183 IPR000157 GO:0007165
Amo13g5763 1036 Gene3D - 11 188 IPR035897 -
Amo13g5763 1036 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 190 451 IPR027417 -
Amo13g5763 1036 Pfam C-JID domain 904 1036 IPR045344 -
Amo13g5763 1036 SUPERFAMILY Toll/Interleukin receptor TIR domain 11 161 IPR035897 -
Amo13g5763 1036 Pfam TIR domain 17 183 IPR000157 GO:0007165
Amo13g5763 1036 SUPERFAMILY L domain-like 558 837 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g5763 Amo-Chr13 159710633 159715080 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g5763 13 833 WRKY Transcription Factor Family AT4G12020 27.896 8.21e-66 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g5763 - - ahf:112792657 1845.86