Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g5740 ATGATCATGGACTTTCAAGTCGTTGTTCTCGCCGGCGGGGTCTCCAAGAAACTCCTCCCTCTCGTTTCCAAGGAGATTCCGAACGCCTTGCTTCCGGTGGCGAACCGGCCTGTTATCTCTTACGTGCTCGAGCTATTGGAGCTTAGCAACCTCAAAGATCTCATTGTGGTAGTCGAAGGCGAAGATGCTGCTCTTAATGTTGGGGGCTGGATATCGGCGGCTTATGCTGATCGCCTCCATGTCGAGGTTGCTGCAGTTCCCGAGGATGTAGGAACTGCTGGTGCTATTCGAGCGATTGCACACCACCTAACTGCTAAGGACATATTGGTTGTCAGTGGTGATCTTGTTTCTGATGTGCCACTTGGTGCAGTTGCAGCTACTCATAGGCGGCATGATGCTGTTGTCACTGCTATGCTTTGTTCTGCTCCTGTAAGTGGGCCTTCAGAGTCAGGATCCTCTGGTGGGAAAGACAAAACCAAGAAACCTGGCCGCTATAACTTGATAGGATTGGATCCCACACAACAGTTCTTACTTCACATAGCAACTGGAGCTGAAGTTGAAAAAGATCTCCGAGTTCAGAAGAGCATACTCCGTGCAGCTGGCGAGATAGAAATCAGAGCTGATTTAATGGATGCTCACTTGTATGCATTCAAAAGATCAATTTTACAAGAAGTTTTAGATCAAAAGGGTACATTTCATAGCCTAAAACATGATGTATTGCCATATCTTGTCCGAAGCCAACTGAAATCAGAAGCATTACTGAATGGCGTAGCACAAGTAGAAGAAAATGGAACCGAGAAGATTATTGCTCAAAGCAATCAACAAATGTTATCACAAATACTTGCTAATGCATCTGAGCGGACGTTTCATCAACGATATGCTTTGAGTCCTAATGGCACTTCTTTCAGAAAAACTCATAAATGTTGTGTTTATATTGCCGGAAGCAACAGGTATTGTGCTCGCTTGAATTCTATACAAGCATACAGCGATATAAATCGAGATGTGATAGGAGAAGCTAATCATTTGTCAGGGTATTCATTCTCTGCTCAAAATAACATTATCCATCCTTCAGCAGAGCTTGGAGCAAAAACAACTGTAGGACCACATTGTATGCTTGGGGAAGGTTCACAGATGGGTGACAAATGCAGTGTGAAACGGTCTGTCATTGGCCGTCACTGCAGGATAGGTGCAAATGTTAAGGTTGTTAATTCAATAGTTATGAATCATGTTACCATTGGTGACGGTTGTTCAATCCAAGGTTCAGTTATCTGCAGCAACGTACAGCTACAAGAACGTGCCGTACTAAAAGATTGTCAAGTCGGAGCAGGTTTTGTGGTTGCTGCTGGTAGTGAGTGCAAAGGGGAGGTCTTAGCTAAGAAATGA 1383 0.4447 MIMDFQVVVLAGGVSKKLLPLVSKEIPNALLPVANRPVISYVLELLELSNLKDLIVVVEGEDAALNVGGWISAAYADRLHVEVAAVPEDVGTAGAIRAIAHHLTAKDILVVSGDLVSDVPLGAVAATHRRHDAVVTAMLCSAPVSGPSESGSSGGKDKTKKPGRYNLIGLDPTQQFLLHIATGAEVEKDLRVQKSILRAAGEIEIRADLMDAHLYAFKRSILQEVLDQKGTFHSLKHDVLPYLVRSQLKSEALLNGVAQVEENGTEKIIAQSNQQMLSQILANASERTFHQRYALSPNGTSFRKTHKCCVYIAGSNRYCARLNSIQAYSDINRDVIGEANHLSGYSFSAQNNIIHPSAELGAKTTVGPHCMLGEGSQMGDKCSVKRSVIGRHCRIGANVKVVNSIVMNHVTIGDGCSIQGSVICSNVQLQERAVLKDCQVGAGFVVAAGSECKGEVLAKK* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g5740 460 Gene3D Hexapeptide repeat proteins 352 456 - -
Amo13g5740 460 MobiDBLite consensus disorder prediction 143 163 - -
Amo13g5740 460 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT GAMMA 3 460 - -
Amo13g5740 460 Pfam Nucleotidyl transferase 8 149 IPR005835 GO:0009058|GO:0016779
Amo13g5740 460 SUPERFAMILY Nucleotide-diphospho-sugar transferases 6 426 IPR029044 -
Amo13g5740 460 CDD eIF-2B_gamma_N 5 222 - -
Amo13g5740 460 CDD LbH_eIF2B_gamma_C 371 451 - -
Amo13g5740 460 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 2 351 IPR029044 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g5740 5 451 Eukaryotic Initiation Factors Gene Family AT4G18300 22.199 2.00e-19 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g5740 K03241 - gmx:100799460 774.622