Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g5724 ATGGCTTCTCCAATTAGCGGAGGCTACTCTGGCTCTGGCTCTGAGGGAGATCCACAGCAGCATATAATGGATCAAAGGAAGAGGAAGAGAATGCAATCGAATCGGGAATCGGCGAGGAGATCGAGGATGAGGAAGCAGCAGCATCTTGATAGCCTGATTTCCCAGACTGATGAGCTGAAGAAGGAGAACAGCCAGATCAGCACAAGCATAGGGATCACCACAGAGCTTTATCTCAACATAGAATCTGAGAATGCAATCTTGAGGGCTCAGATGGCTGAACTTTCCAACAGGTTGCATTCTCTCAATGACATCATCAATTACATCAACTCTGTGTCTAGCACCACCACCGGCAACCACCACTTTCTTCATGCTCATGAGGCTCAGGAGACTCTTTTCAATGATTGTGGCTTCATGGACCCTTTCAACTCTCTGGCTGCTAATCAACCAATCATGGACATGCTCATGTATTGA 471 0.4713 MASPISGGYSGSGSEGDPQQHIMDQRKRKRMQSNRESARRSRMRKQQHLDSLISQTDELKKENSQISTSIGITTELYLNIESENAILRAQMAELSNRLHSLNDIINYINSVSSTTTGNHHFLHAHEAQETLFNDCGFMDPFNSLAANQPIMDMLMY* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g5724 156 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 24 70 IPR004827 GO:0003700|GO:0006355
Amo13g5724 156 SUPERFAMILY Leucine zipper domain 26 80 IPR046347 GO:0003700|GO:0006355
Amo13g5724 156 Pfam bZIP transcription factor 26 84 IPR004827 GO:0003700|GO:0006355
Amo13g5724 156 MobiDBLite consensus disorder prediction 1 65 - -
Amo13g5724 156 MobiDBLite consensus disorder prediction 1 19 - -
Amo13g5724 156 PANTHER BZIP TRANSCRIPTION FACTOR 44 9 155 - -
Amo13g5724 156 MobiDBLite consensus disorder prediction 48 65 - -
Amo13g5724 156 MobiDBLite consensus disorder prediction 20 47 - -
Amo13g5724 156 SMART brlzneu 22 86 IPR004827 GO:0003700|GO:0006355
Amo13g5724 156 Gene3D - 24 78 - -
Amo13g5724 156 Coils Coil 77 104 - -
Amo13g5724 156 CDD bZIP_plant_GBF1 27 77 IPR045314 GO:0003700|GO:0006355
Amo13g5724 156 PANTHER BZIP TRANSCRIPTION FACTOR BZIP124 9 155 - -
Amo13g5724 156 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 29 44 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g5724 Amo-Chr13 159285330 159286256 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g5724 19 156 bZIP Transcription Factor Family AT4G34590 50.000 4.67e-36 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Amo13g5724 bZIP_1 8.7e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g5724 K25786 - gmx:778139 169.088