Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g5715 ATGGCGTCGCCCACCAAGGAACGTGAAAACTTCGTCTACACCGCCAAACTTGCTGAACAAGCCGAGCGCTATGAAGAAATGGTGGATGCAATGAAGAATGTAGCGAAGCTAAACGTGGAGTTGACGGTTGAGGAGCGAAACCTTCTGTCAGTCGGGTACAAGAATGTAGTTGGGGCTCGCAGGGCTTCATGGAGGATTCTCTCCTCCATTGAGCAGAAGGAAGAATCCAAAGGGAACGATGTTAGCGTTAAGCGGATCAAGGAGTATAGGAACAAAGTTGAATCTGAGTTGTCTAACATCTGTACTGATATCATGACTGTTATTGATGAACACCTTATCCCTTCTTGTTCTGGTGGTGAACCTAGTGTATTCTTCTATAAGATGAAGGGCGACTATTATCGGTATCTGGCTGAATTCAAGTCTGGAGATGAGAGAAAGGAGGCTGCTGATCAGTCCATGAAAGCATATCAGGCGGCTTCTACTACTGCCGAAGCTGAGTTACCTCCAACGCATCCCATTAGATTGGGTTTGGCTTTGAACTTCTCTGTTTTCTATTATGAAATTTTGAACTCTCCTGAAAGGGCCTGTCACCTTGCTAAGCAGGCATTTGATGTAGCAATTGCTGAGTTGGATACTCTAAGCGAAGAGTCTTACAAAGACAGCACATTAATTATGCAGCTTCTGAGGGACAACCTTACCTTGTGGACCTCTGACATCCCTGAAGATGGAGGCATTAGAAAGAAATTCAATAGGTATAACAATAACAGGATAAAGTATTTGTCAAAAGTTTTAAACTATTTAAGTTTTATTTTATTTTAA 819 0.4261 MASPTKERENFVYTAKLAEQAERYEEMVDAMKNVAKLNVELTVEERNLLSVGYKNVVGARRASWRILSSIEQKEESKGNDVSVKRIKEYRNKVESELSNICTDIMTVIDEHLIPSCSGGEPSVFFYKMKGDYYRYLAEFKSGDERKEAADQSMKAYQAASTTAEAELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDVAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGIRKKFNRYNNNRIKYLSKVLNYLSFILF* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g5715 272 PANTHER 14-3-3 PROTEIN 5 243 IPR000308 -
Amo13g5715 272 ProSitePatterns 14-3-3 proteins signature 2. 218 237 IPR023409 -
Amo13g5715 272 Gene3D - 1 246 IPR036815 -
Amo13g5715 272 Coils Coil 14 34 - -
Amo13g5715 272 PRINTS 14-3-3 protein zeta signature 120 142 IPR000308 -
Amo13g5715 272 PRINTS 14-3-3 protein zeta signature 182 208 IPR000308 -
Amo13g5715 272 PRINTS 14-3-3 protein zeta signature 209 238 IPR000308 -
Amo13g5715 272 PRINTS 14-3-3 protein zeta signature 40 69 IPR000308 -
Amo13g5715 272 PRINTS 14-3-3 protein zeta signature 155 181 IPR000308 -
Amo13g5715 272 PRINTS 14-3-3 protein zeta signature 89 113 IPR000308 -
Amo13g5715 272 SMART 1433_4 8 249 IPR023410 -
Amo13g5715 272 SUPERFAMILY 14-3-3 protein 7 238 IPR036815 -
Amo13g5715 272 ProSitePatterns 14-3-3 proteins signature 1. 46 56 IPR023409 -
Amo13g5715 272 PANTHER 14-3-3 DOMAIN-CONTAINING PROTEIN-RELATED 5 243 - -
Amo13g5715 272 Pfam 14-3-3 protein 15 236 IPR023410 -
Amo13g5715 272 PIRSF 14-3-3 2 248 IPR000308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g5715 Amo-Chr13 159219782 159222780 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g5715 6 244 14-3-3 family AT2G42590 83.682 2.01e-150 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g5715 K06630 - gmx:100807980 453.751