Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g5708 ATGAATAATCCCACCGTCGTTGAGAGGTTCTCTGAGTTCTATGATAATTGGATTTGTAAACTCCAAGAGATCCTCAAGCAGCTTCTTCATGTTTCTAACCAACACCACCTTTTGACCGAACATGATCTTCAATCTCTGGTCTCTAAAGTCACAACACACTTGAAAGAGTACTACACCGTCAAATGGAATCTAGCGCGTGAGGACGTTGTTATCTTTTTCTCGCCGCCTTGGCTAACCCCTCTTGAAAAGGCATACCTTTGGATCACGGGCTGGAAGCCTTCCACCGCTTTCAAAGTGCTGGAGTCTCTTAAGAAGAGTGACTTATTTGAGATGACAGAGGAACAGGAGAGGAAGATAGGGGGACTGAGGATGAGGATGAGGATGGAAGAGGAGAAGGTTGAGAGGGAGATGGAGAGGCAGCAGGTTGCCATGGCCGATAGCAAGATCGTGGAGTTGGCTAAACTATCTAGAAGAGCCATGTGGAAGAAGAACAATGATGGAGAAGATTATGATGAGGTGGTGCAGTTGGCTATGAAGGATGTGTTTGGGGGATTGGAGAGAATAATGAAAGCTTCTGATTGTGCGAGGTTGAAAACGCTAAAAGGGATTTTGGATCTGAATACAAGATATGAAAAAAACAAGATGTACTCCTCAAATCTTGACTCAACTTCAATGTCAAATTCTTTCACTGTAACAATGGTTGCATATACTTTCTCTTATCAGATATGGAAGAGATTAGAAACTTTCTTTGCTTCGCAAACAAGAGTTAAAGAAAATCAATTGAAAAACAAGTGGAACAATATAAAAAAAAAAAAGGAAACTATGACACACTACTTACTTGAAACAAAGAAAACATGGATGCACTAA 867 0.4095 MNNPTVVERFSEFYDNWICKLQEILKQLLHVSNQHHLLTEHDLQSLVSKVTTHLKEYYTVKWNLAREDVVIFFSPPWLTPLEKAYLWITGWKPSTAFKVLESLKKSDLFEMTEEQERKIGGLRMRMRMEEEKVEREMERQQVAMADSKIVELAKLSRRAMWKKNNDGEDYDEVVQLAMKDVFGGLERIMKASDCARLKTLKGILDLNTRYEKNKMYSSNLDSTSMSNSFTVTMVAYTFSYQIWKRLETFFASQTRVKENQLKNKWNNIKKKKETMTHYLLETKKTWMH* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g5708 288 ProSiteProfiles DOG1 domain profile. 7 236 IPR025422 GO:0006351|GO:0043565
Amo13g5708 288 PANTHER - 5 207 - -
Amo13g5708 288 Pfam Seed dormancy control 25 101 IPR025422 GO:0006351|GO:0043565
Amo13g5708 288 PANTHER PROTEIN DOG1-LIKE 4 5 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g5708 Amo-Chr13 159081863 159083975 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g5708 10 224 bZIP Transcription Factor Family AT3G12250 27.602 6.08e-13 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g5708 - - pvu:PHAVU_006G175000g 245.358