Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g5707 ATGATAGTGATTCTTCATCTGATTTGTCAGAAACAGATGAGTTTGAGGCCAGGAAAGTCCAGGAGAGGAGGGGAACAGCGCTTTTTGCCACGGCCGGCGAGTTTGAATGCGTTTGATATCATATCGTTTTCTCCTGGTTTTGATCTCTCTGGCTTGTTTGAGGAGAAGGGTGACGAGGCGAGGTTTGTTTCCGGTGCGCCGGTTTCCAAGATCATATCGAAATTGGAGGAAAGATTGCCTTCAGTTGGTTTGAGCTTTCACCGGGAGGAAGAAGGACTGCAGGGTAAGTTTGGAAGGTTCCAGAGAAGGACATGA 315 0.4794 MIVILHLICQKQMSLRPGKSRRGGEQRFLPRPASLNAFDIISFSPGFDLSGLFEEKGDEARFVSGAPVSKIISKLEERLPSVGLSFHREEEGLQGKFGRFQRRT* 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g5707 104 PANTHER - 29 82 - -
Amo13g5707 104 Gene3D Kinase associated domain 1, KA1 32 103 - -
Amo13g5707 104 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 29 82 - -
Amo13g5707 104 CDD CIPK_C 36 92 - -
Amo13g5707 104 Pfam NAF domain 32 85 IPR004041 GO:0007165
Amo13g5707 104 ProSiteProfiles NAF domain profile. 30 54 IPR018451 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g5707 Amo-Chr13 159065860 159066305 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g5707 21 77 CBL-interacting serine-threonine protein kinases AT5G45810 77.193 1.84e-22 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g5707 - - ncol:116266894 99.7525