Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g5706 ATGGCTGAGGCAGTGGTGGTTCCCAACAAGAACAAGGAGAGCAGCCTCCTCCTGGGCCGCTTCGAGATAGGAAAGCTCCTGGGCCACGGAACCTTCGCGAAGGTGTACCACGCGCGCAACATCAAGACCGGTGAGGGCGTCGCCATCAAGGTCATCGACAAGGAGAAGATCCTCAAGGGCGGCCTCGTCTCCCACATCAAGCGTCTTCCACCACGACCTAAAACCGGAGAATCTCTTGCTGACGAGAACGGCGACCTTAAGGTCTCCGATTTCGGCCTGAGCGCCGTTTCTGATCAGATTAGGCAGGATGGCTTGTTCCACACCTTTTGCGGAACCCCTGCTTACGTGGCACCTGAGGTTCTTGCCAGGAAGGGTTACGACGCAGCGAAGTTGATTATCTGA 402 0.5672 MAEAVVVPNKNKESSLLLGRFEIGKLLGHGTFAKVYHARNIKTGEGVAIKVIDKEKILKGGLVSHIKRLPPRPKTGESLADENGDLKVSDFGLSAVSDQIRQDGLFHTFCGTPAYVAPEVLARKGYDAAKLII* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g5706 133 Pfam Protein kinase domain 79 128 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g5706 133 SUPERFAMILY Protein kinase-like (PK-like) 12 128 IPR011009 -
Amo13g5706 133 PANTHER - 14 68 - -
Amo13g5706 133 ProSiteProfiles Protein kinase domain profile. 1 133 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g5706 133 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 14 68 - -
Amo13g5706 133 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 77 131 - -
Amo13g5706 133 SMART serkin_6 21 132 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g5706 133 Gene3D Transferase(Phosphotransferase) domain 1 74 131 - -
Amo13g5706 133 ProSitePatterns Protein kinases ATP-binding region signature. 27 50 IPR017441 GO:0005524
Amo13g5706 133 PANTHER - 77 131 - -
Amo13g5706 133 Gene3D Phosphorylase Kinase; domain 1 2 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g5706 Amo-Chr13 159065047 159065660 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g5706 10 68 CBL-interacting serine-threonine protein kinases AT4G18700 72.881 3.95e-24 94.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Amo13g5706 Pkinase 1.9e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g5706 - - gmx:100814720 113.62