Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g5704 CCAGACATTGATTCTTTATCTGAACTGCCCGCTTCTGTTGTTAATGGGAATGATTCCCTCCCTGGTAATATAATATCCACTACAATTGGTGGAAAAGATGGGGAGCCCAAACAGACTATAAGTTACATGGCAGAACGTGTCGTGGGTACTGGGTCATTTGGAATCGTTTTCCAGGCAAAATGCTTGGAAAATGGGGAGGCAGTAGCCATCAAGAAAGTTTTACAGGACAAAAGATATAAGTGTCGTGAACTAGAGTTAATGCGCATAATGGATCATCCAAATATCATCTGTCTGAAGCATCATTTCTTTTCCACTACAAGTACTGGTGAGCTGTTCCTTAATTTGGTGATGGAATATGTTCCCGAGTCTATGTATCGAGTCTTGAAGTTCTATAGCACTGCTAACCAAAGAATGCCTCTTATCTATGTTAAACTTTATATGTACCAGATTTTCAGGGGGCTGGCTTATATCCACACTGTCCCTGGAGTATGCCACAGAGATTTGAAGCCACAAAATATACTGGTTGACCCTGTTACACACCAGGTTAAGATATGTGATTTTGGAAGTGCAAAAGTGCTGGTCAAAGGAGAAACTAATATATCATATATATGTTCCCGGTTCTATCGCGCACCAGAACTCATATTTAGTGCTACTGAGTATACTACTTCAATTGATATTTGGTCAGCTGGTTGTGTCCTTGCTGAACTGCTTTTGGGCCAGCCATTGTTTCCGGGTGAAAATGCAGTGGATCAGGTTGCAGAGATTTTCAAGGTCCTTGGCACACCCACTCGAGAGGAAGTCCGCTGCATGAATCCAAACTACAACAACTTCAGGTTTCCACAGATAAAAGCACACCCATGGCACAAGATATTCCACAAAAAGATGCCTCCCGAAGCAATTGATCTCACTTCCCGGCTTCTGCAGTATTCCCCTAGTCTCCGATGTACTGCACTAGAAGCTTGTGCACACCCATTCTTTGATGAACTTCGTGAACCCCATGCTCGCTTGCCAAATGGTCGTCCATTTCCACCACTATTCAACTTTAAACAAGAGCTATCCACAGCACCTCCAGAGCTTGTTAACAAGTTGATCCCTGGCCACATGAAGCGGCAACTAGCGCTGCAACTTCCCCATTCTGCAGGAACATGA 1149 0.4369 PDIDSLSELPASVVNGNDSLPGNIISTTIGGKDGEPKQTISYMAERVVGTGSFGIVFQAKCLENGEAVAIKKVLQDKRYKCRELELMRIMDHPNIICLKHHFFSTTSTGELFLNLVMEYVPESMYRVLKFYSTANQRMPLIYVKLYMYQIFRGLAYIHTVPGVCHRDLKPQNILVDPVTHQVKICDFGSAKVLVKGETNISYICSRFYRAPELIFSATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQVAEIFKVLGTPTREEVRCMNPNYNNFRFPQIKAHPWHKIFHKKMPPEAIDLTSRLLQYSPSLRCTALEACAHPFFDELREPHARLPNGRPFPPLFNFKQELSTAPPELVNKLIPGHMKRQLALQLPHSAGT* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g5704 382 ProSiteProfiles Protein kinase domain profile. 42 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g5704 382 Gene3D Transferase(Phosphotransferase) domain 1 122 369 - -
Amo13g5704 382 SMART serkin_6 42 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g5704 382 Pfam Protein kinase domain 42 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g5704 382 ProSitePatterns Serine/Threonine protein kinases active-site signature. 163 175 IPR008271 GO:0004672|GO:0006468
Amo13g5704 382 SUPERFAMILY Protein kinase-like (PK-like) 41 354 IPR011009 -
Amo13g5704 382 Gene3D Phosphorylase Kinase; domain 1 27 121 - -
Amo13g5704 382 PANTHER BNAANNG31110D PROTEIN 7 376 - -
Amo13g5704 382 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 7 376 - -
Amo13g5704 382 CDD STKc_GSK3 37 329 IPR039192 -
Amo13g5704 382 ProSitePatterns Protein kinases ATP-binding region signature. 48 72 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g5704 Amo-Chr13 159027962 159032036 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g5704 46 337 MAP Kinase Gene Family AT3G59790 35.526 8.01e-56 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Amo13g5704 Pkinase 3.9e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g5704 K14502 - gmx:100779909 686.797