Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g5699 ATGAAGACTTCTGAGGAATGGAAACCTTTTATGGTAATGATAGCAATTGATTTTTCTTCCACCATAGTGAACATTCTTCTAAAGAAAGTTCTTGAGGAAGGGATGGACCATTTGGTGTTTATCACATACCGTTTGTCAATTTCAACCATTTTCCTAGTCCCTATCAGCTACTTTTGGGAAAGAAACGGAAGACCAAGGCTCACATTTAGAATTTTGTGTTACCTTTTCTTCAGTGCCATTGTTGGGGCATCAGTCACACAGTACTTCTTCCTTCTTGGGATCCAATACACCTCTGCTACCTTTGCTTGTGCCTTTGTCAATATGGTACCTGTGATCACATTCATTATGGCATTGCCATTTGGATTAGAGACTCTGAACATCAAATGTAACAGTGGGAAAGCCAAGATTCTTGGTACACTGGTGTGTGTAGGAGGGGCATTGTTGTTGACACTTTATAAAGGAAAGCCCTTGTTTGATGTTTCTCACTATGAGTCTGCAGCAGCATCAACAGGCATGAGATCTGCAATGAAGCAACGTTCTTCTCCACCTACTAGAATCATTGAGAAATGGACCATTGGTGTAATAGCTTTGATTCTGGGAACACTGTTTTGGTCTTCATGGTTTATCTTGCAATCAACTATAGGGAAGCTTTATCCATGCCGGTATTCTAGCACAGCCATCATGACTTTGTTTGGAGCCATTCAATCAGCCATCCTTGCTTTGTCCACTGGCAGAGACTTGTCCATGTGGATCCCCAATGGCAGGATACAAATACTCACTGTTCTCTATTCTGGCATGGTTGGGTCAGGGTTGTGCTATGTGGGGATGTCATGGTGTGTTAAAAAGAGGGGTCCTGTGTTTACTGCAGCATTTAGCCCTCTTGTTCAGATAATGTCAGCCATGATTGATATCCCAGTCTTGCATGAGCAGCTCCATCTTGGAAGTGTGTTGGGATCCATGCTGGTAATGGTGGGATTGTATATTCTTCTGTGGGGTAAGAGCAAGGATAATCAGAATGGTGTGACAAATTTAGTAGAAGAAGGTGGAAACAAGGAACAAGTCCCTCCCCCACAAACAACACAACATGTTGCTATAACCTGCGATACACGCTCCAACTGA 1119 0.4272 MKTSEEWKPFMVMIAIDFSSTIVNILLKKVLEEGMDHLVFITYRLSISTIFLVPISYFWERNGRPRLTFRILCYLFFSAIVGASVTQYFFLLGIQYTSATFACAFVNMVPVITFIMALPFGLETLNIKCNSGKAKILGTLVCVGGALLLTLYKGKPLFDVSHYESAAASTGMRSAMKQRSSPPTRIIEKWTIGVIALILGTLFWSSWFILQSTIGKLYPCRYSSTAIMTLFGAIQSAILALSTGRDLSMWIPNGRIQILTVLYSGMVGSGLCYVGMSWCVKKRGPVFTAAFSPLVQIMSAMIDIPVLHEQLHLGSVLGSMLVMVGLYILLWGKSKDNQNGVTNLVEEGGNKEQVPPPQTTQHVAITCDTRSN* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g5699 372 Pfam EamA-like transporter family 192 330 IPR000620 GO:0016020|GO:0016021
Amo13g5699 372 Pfam EamA-like transporter family 12 150 IPR000620 GO:0016020|GO:0016021
Amo13g5699 372 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 153 - -
Amo13g5699 372 SUPERFAMILY Multidrug resistance efflux transporter EmrE 249 335 - -
Amo13g5699 372 PANTHER WAT1-RELATED PROTEIN 9 352 IPR030184 GO:0016021|GO:0022857
Amo13g5699 372 PANTHER WAT1-RELATED PROTEIN 9 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g5699 Amo-Chr13 158990253 158992414 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g5699 4 264 Nodulin-like Gene Family AT3G30340 47.893 4.24e-88 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g5699 - - gmx:100791663 550.821