Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g5692 ATGGGAAGCCAAAAGGAGGAGGTGAAGCTTATAAGCTTTTTGTGTAGTCCAGTTTGTCGCAGAGTTGAATGGGGTCTGAGACTGAAGGGTATTGATTACGAGTACATAGAAGAAGACATCTTCAACAAGAGCAACCTCCTTTTGGAGCTGAACCCTGTCCACAAAAAGGTTCCTGTTCTTGTTCATGGTGACAAGGCAATTGCCGAGTCCCTCGTCATCCTCGAATACATGGATGAAACATGGAAGCAATATCCACTTCTGCCTCAAGATCCTTATGAAAGAGCTCTTGTACGTTTTTGGATCAAGTTTGCCGATGAAAAGGTTATGTACGGTGGATATGTTGCAATGATATCGATCGGGGAGGAGCAGGAAAAGAGAGTGGATGAGGTGAGGAAAGGAATGGACAAGTTAGAAGAACTTATCAAAGGGAAGAGATTCTTTGGAGGTGACAGGATTGGATTCCTTGACATAGCGCTTGGATGGATCACATACTTGCTCCCTGTTTGGGAGGAGGTTGGGTCTATGAAGATTCTGGATCCCCTCAAGTGTCCTGCCATCTCTGCTTGGGTCAACAACATTCTCAACCACCCTCTCCTCAACGACTGCCTCCCCCCTAAGGATGACTTGCTTGCTTATAACCACCGTCGCAGAAAGCACAAAGATGTGAAGTTGGTGAGCTATTGGGTGAGTCCGTTCGGTAAAAGAGCTGAGTGGGCATTGAAACTGAAGGGTGTGGAATATGAGTACATAGAAGAAGATATATACAACAAGAGCAACCTTCTTCTTGAGCTGAACCCGGTCCACAAGAAGGTTCCAGTTCTTGTACATGGCAACAAGGCAATCGCGGAATCATTTGTGATCCTTGAATACATCGATGAAACATGGAAGCAGTATCCATTGATGCCTCACGATCCTTATCAAAGAGCTCATGCTCGCTTTTGGGCTATTTCTGCTGAACAAAAGGTTGGGGAAGGCTCATGGATTGCACTGATTAAAAGCGGAGAAGAAAAGGAAAAGGCTCTGGATAAAGCCTCAGAGGTACTTGAGAAGATAGAGGAAGAGATCAAGGGTAAGAAATTCTTTGGAGGGGACAACATTGGATACCTCGACATTGCACTTGGATGGATCCCTTGCATTATTCCCCTTTGGGAGGAAGTTGGGTCAATGCAAATAATTGACCCTCTGAAATTGCCAGCCATCAATGAATGGATGACCAATTTCCTCAACCACCCTGTGACTATGGAAAGAAGAGAAGATGTGAAGCTGTTCAACTTTCATGCGAGTCCATTTGGTCAGAGGGTGATCTGGGCTCTGAAACTAAAGGGTGTTGATTATGAGTGCATAGAAGAAGACATCTTCAACAAGAGCAACCTCCTCCTTGAGCTGAACCCCGTTCACAAGAAGGTGCCTGTTCTTGTTCATTGCAACAAACCAATTGCAGAATCACTTGTGATCCTTGAATACATCGATGAAACATGGAAGCAGTATCCGTTGATGCCTCAGAATCCTTGTCAAAGAGCTCATGCTCGCTTTTGGGCTAATTTTGCTGAACATAAGGAAGTTGGATCAATGAAGATATTAGACCCTTTGAAATTCCCAGCCATCAATGCATGGATCACCAATTTCCTCAGCCATCCTACCATCAACGACACTCTGCCCCAAAGAGACAAAATGGTTGTTTACTACCACAGTCGCAGAAAGGAAACAATGGGAAGCAAAGATGTGAAGGTGTTGAACTTTTGGGTGAGTCCGTTCGGTAAAAGAGTTGAGTGGGCACTGAAACTGAAGGGTGTGGAATACGAGTACATAGAAGAAGATATATCCAACAAGAGCAACCTCCTTCTTGAGCTGAACCCGGTTTACAAGAAGGTTCCAGTTCTTGTTCATGGCAACAAGGCAATCGCGGAGTCATTTGTGATCCTCGAATACATCGATGAAACATGGAAGCAGTACCCGTTGATGCCTCACGATCCTTATGAAAGGGCTCATGCTCGCTTTTGGGCTACTTCTGCTCAACAAAAGCTTGGGAAGGAAGGGTCATGGACTGCGCTGATTAAGAGCGGAGAAGAAAAGGAAAAGGCTCTGAATACAGCCTCAGAGGTACTTGAGAAGTTAGAGGAAGAGATTAAGGGTAAGAAATTCTTTGGAGGGGACAACATTGGATACCTCGACATTGCACTTGGTTGGATCTCTTACATTATTCCCATCTGGGAGGAAGTTGGGTCAATACAAATAATTGATCGTCTGAAATTCCCAGCCATCAATGAATGGATGACCAATTTCCTCAACCACCCTGTGGTCAAGGATTCCTTGCCCCCAAGAGACAAGGCCCTTGATTACTACCACCTCTCAAGGGTGATTTGGGCTCTGAAACTAAAGGGTGTTGATTATGAGTGCATAGAAGAAGACATCTTCAACAAGAGCAACCTCCTCCTTGAGTTGAACCCCGTTCACAAGAAGGTGCCTGTTCTTGTTCATTGCAACAAACCAATTGCAGAATCACTTGTGATCCTTGAATACATCGATGAAACATGGAAGCAGTATCCGTTGATGCCTCAGAATCCTTATCAAAGAGCTCATGCTCGCTTTTGGGCTAATTTTGCTGAACATAAGCTTTTGGTGGCTGCCCGGATCGCAAGGCTTAGTAGTGAGGAAGAACAGGAAAAGGCTATAGGTTACCTTGACATTGTAATTGGATGGATCTCTTACTGGATTCCTGTTTGGGAGGAAGTTGGATCAATGAAGATATTAGACCCTTTGAAATTCCCAGCCATCAATGCATGGATCACCAATTTCCTCAGCCATCCTATCATCAACGACACTCTGCCCCAAAGAGACAAAATGGTTGTTTACTACCACAGTCGCAGAAAGGAAATAATGGGAAGCGAAGATGTGAAGGTGCTGTGCTTTTGGGCGAGTCCATTTTCCTTACGGGTTGAATGGGCTCTGAAACTGAAGGGTGTTGATTATGAGTACATAGAACAAGATGTATTCAACAAGAGCACCCTCCTTCTGGAGCTGAACCCCATTCACAAGAAGGTTCCGGTTCTTGTTCATGCCAGCAAACCAATAGTTGAGTCATTTGTCATCCTTGAATACATCGATGAAACATGGAAGCAGCATCCATTGCTGCCTCACGATCCTTATCAAAGAGCTCATGCTCGCTTTTGGGCTAATTTTGCTGAAAATAAGCTATTATATGCTTCATTCATTGCCATGGTCGCGAGTGGGGATGACACCGAAAAGGCTCTGAATGTAGCAAGAGACTCGGTAGAAAAGATAGAACAAGAGATTAAGGGGAAGAAATTCTTTGGAGGAGACAACATTGGATACCTTGACATTGCACTTGGATGGATATCTTACTGGATCCCTGTTTATGAGGAAGTTGGATCAATGCAGATATTAGATCCTTTGAGATTCCCAGCCATCAATGCATGGATGACCAATTTCCTCAACCACCCTGTGATCAAGGACAGATTGCCTCCTAGAGATGACATGGTTGCTTACTTCCACACTCGCAAGAAGATTGTGTCTCCTACTTACCATGACTTGATGAAGTATCTTTGA 3567 0.4444 MGSQKEEVKLISFLCSPVCRRVEWGLRLKGIDYEYIEEDIFNKSNLLLELNPVHKKVPVLVHGDKAIAESLVILEYMDETWKQYPLLPQDPYERALVRFWIKFADEKVMYGGYVAMISIGEEQEKRVDEVRKGMDKLEELIKGKRFFGGDRIGFLDIALGWITYLLPVWEEVGSMKILDPLKCPAISAWVNNILNHPLLNDCLPPKDDLLAYNHRRRKHKDVKLVSYWVSPFGKRAEWALKLKGVEYEYIEEDIYNKSNLLLELNPVHKKVPVLVHGNKAIAESFVILEYIDETWKQYPLMPHDPYQRAHARFWAISAEQKVGEGSWIALIKSGEEKEKALDKASEVLEKIEEEIKGKKFFGGDNIGYLDIALGWIPCIIPLWEEVGSMQIIDPLKLPAINEWMTNFLNHPVTMERREDVKLFNFHASPFGQRVIWALKLKGVDYECIEEDIFNKSNLLLELNPVHKKVPVLVHCNKPIAESLVILEYIDETWKQYPLMPQNPCQRAHARFWANFAEHKEVGSMKILDPLKFPAINAWITNFLSHPTINDTLPQRDKMVVYYHSRRKETMGSKDVKVLNFWVSPFGKRVEWALKLKGVEYEYIEEDISNKSNLLLELNPVYKKVPVLVHGNKAIAESFVILEYIDETWKQYPLMPHDPYERAHARFWATSAQQKLGKEGSWTALIKSGEEKEKALNTASEVLEKLEEEIKGKKFFGGDNIGYLDIALGWISYIIPIWEEVGSIQIIDRLKFPAINEWMTNFLNHPVVKDSLPPRDKALDYYHLSRVIWALKLKGVDYECIEEDIFNKSNLLLELNPVHKKVPVLVHCNKPIAESLVILEYIDETWKQYPLMPQNPYQRAHARFWANFAEHKLLVAARIARLSSEEEQEKAIGYLDIVIGWISYWIPVWEEVGSMKILDPLKFPAINAWITNFLSHPIINDTLPQRDKMVVYYHSRRKEIMGSEDVKVLCFWASPFSLRVEWALKLKGVDYEYIEQDVFNKSTLLLELNPIHKKVPVLVHASKPIVESFVILEYIDETWKQHPLLPHDPYQRAHARFWANFAENKLLYASFIAMVASGDDTEKALNVARDSVEKIEQEIKGKKFFGGDNIGYLDIALGWISYWIPVYEEVGSMQILDPLRFPAINAWMTNFLNHPVIKDRLPPRDDMVAYFHTRKKIVSPTYHDLMKYL* 1189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g5692 1188 CDD GST_N_Tau 575 648 - -
Amo13g5692 1188 SFLD Main.3: Omega- and Tau-like 961 1176 IPR045073 -
Amo13g5692 1188 SFLD Main.3: Omega- and Tau-like 219 414 IPR045073 -
Amo13g5692 1188 SFLD Main.3: Omega- and Tau-like 571 782 IPR045073 -
Amo13g5692 1188 SFLD Main.3: Omega- and Tau-like 4 219 IPR045073 -
Amo13g5692 1188 CDD GST_N_Tau 8 81 - -
Amo13g5692 1188 SUPERFAMILY GST C-terminal domain-like 79 218 IPR036282 -
Amo13g5692 1188 Gene3D - 654 784 - -
Amo13g5692 1188 Gene3D - 87 219 - -
Amo13g5692 1188 Gene3D - 851 889 - -
Amo13g5692 1188 Gene3D - 1044 1180 - -
Amo13g5692 1188 SFLD Main (cytGST) 571 782 - -
Amo13g5692 1188 SFLD Main (cytGST) 961 1176 - -
Amo13g5692 1188 SFLD Main (cytGST) 420 519 - -
Amo13g5692 1188 SFLD Main (cytGST) 219 414 - -
Amo13g5692 1188 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 1047 1170 IPR010987 -
Amo13g5692 1188 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 785 849 IPR004045 -
Amo13g5692 1188 SUPERFAMILY Thioredoxin-like 419 518 IPR036249 -
Amo13g5692 1188 PANTHER GLUTATHIONE S-TRANSFERASE 418 519 - -
Amo13g5692 1188 PANTHER GLUTATHIONE S-TRANSFERASE 784 891 - -
Amo13g5692 1188 Gene3D - 303 415 - -
Amo13g5692 1188 Gene3D Glutaredoxin 220 302 - -
Amo13g5692 1188 Gene3D Glutaredoxin 572 653 - -
Amo13g5692 1188 Gene3D Glutaredoxin 1 86 - -
Amo13g5692 1188 Gene3D Glutaredoxin 962 1043 - -
Amo13g5692 1188 Gene3D Glutaredoxin 416 501 - -
Amo13g5692 1188 SUPERFAMILY GST C-terminal domain-like 293 420 IPR036282 -
Amo13g5692 1188 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 519 568 IPR045073 -
Amo13g5692 1188 SUPERFAMILY GST C-terminal domain-like 1036 1175 IPR036282 -
Amo13g5692 1188 SUPERFAMILY Thioredoxin-like 784 850 IPR036249 -
Amo13g5692 1188 Pfam Glutathione S-transferase, N-terminal domain 419 491 IPR004045 -
Amo13g5692 1188 Pfam Glutathione S-transferase, N-terminal domain 965 1036 IPR004045 -
Amo13g5692 1188 Pfam Glutathione S-transferase, N-terminal domain 575 646 IPR004045 -
Amo13g5692 1188 Pfam Glutathione S-transferase, N-terminal domain 785 843 IPR004045 -
Amo13g5692 1188 Pfam Glutathione S-transferase, N-terminal domain 222 293 IPR004045 -
Amo13g5692 1188 CDD GST_N_Tau 965 1038 - -
Amo13g5692 1188 SUPERFAMILY Thioredoxin-like 221 319 IPR036249 -
Amo13g5692 1188 SUPERFAMILY GST C-terminal domain-like 498 566 IPR036282 -
Amo13g5692 1188 Coils Coil 688 708 - -
Amo13g5692 1188 CDD GST_C_Tau 658 780 IPR045074 GO:0004364|GO:0006749
Amo13g5692 1188 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 418 497 IPR004045 -
Amo13g5692 1188 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 222 IPR010987 -
Amo13g5692 1188 SFLD Glutathione Transferase (cytosolic) 420 519 IPR040079 -
Amo13g5692 1188 SFLD Glutathione Transferase (cytosolic) 4 219 IPR040079 -
Amo13g5692 1188 SFLD Glutathione Transferase (cytosolic) 785 879 IPR040079 -
Amo13g5692 1188 PANTHER GLUTATHIONE S-TRANSFERASE 519 568 - -
Amo13g5692 1188 CDD GST_C_Tau 305 412 IPR045074 GO:0004364|GO:0006749
Amo13g5692 1188 Pfam Glutathione S-transferase, N-terminal domain 10 80 IPR004045 -
Amo13g5692 1188 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 573 652 IPR004045 -
Amo13g5692 1188 PANTHER GLUTATHIONE S-TRANSFERASE 960 1177 - -
Amo13g5692 1188 PANTHER GLUTATHIONE S-TRANSFERASE 889 958 - -
Amo13g5692 1188 PANTHER GLUTATHIONE S-TRANSFERASE 220 417 - -
Amo13g5692 1188 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 220 417 IPR045073 -
Amo13g5692 1188 PANTHER GLUTATHIONE S-TRANSFERASE 6 218 - -
Amo13g5692 1188 SUPERFAMILY GST C-terminal domain-like 843 957 IPR036282 -
Amo13g5692 1188 CDD GST_C_Tau 1048 1170 IPR045074 GO:0004364|GO:0006749
Amo13g5692 1188 SUPERFAMILY GST C-terminal domain-like 646 783 IPR036282 -
Amo13g5692 1188 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Amo13g5692 1188 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 220 299 IPR004045 -
Amo13g5692 1188 SUPERFAMILY Thioredoxin-like 964 1065 IPR036249 -
Amo13g5692 1188 PANTHER GLUTATHIONE S-TRANSFERASE 570 784 - -
Amo13g5692 1188 Gene3D Glutaredoxin 785 850 - -
Amo13g5692 1188 SUPERFAMILY Thioredoxin-like 8 108 IPR036249 -
Amo13g5692 1188 CDD GST_C_Tau 91 212 IPR045074 GO:0004364|GO:0006749
Amo13g5692 1188 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 657 780 IPR010987 -
Amo13g5692 1188 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 304 430 IPR010987 -
Amo13g5692 1188 CDD GST_C_Tau 855 951 IPR045074 GO:0004364|GO:0006749
Amo13g5692 1188 Coils Coil 334 354 - -
Amo13g5692 1188 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 960 1177 IPR045073 -
Amo13g5692 1188 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 889 958 IPR045073 -
Amo13g5692 1188 CDD GST_N_Tau 785 845 - -
Amo13g5692 1188 Pfam Glutathione S-transferase, C-terminal domain 688 765 IPR004046 -
Amo13g5692 1188 Pfam Glutathione S-transferase, C-terminal domain 334 411 IPR004046 -
Amo13g5692 1188 Gene3D - 518 571 - -
Amo13g5692 1188 Gene3D - 890 961 - -
Amo13g5692 1188 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 963 1042 IPR004045 -
Amo13g5692 1188 SUPERFAMILY Thioredoxin-like 574 672 IPR036249 -
Amo13g5692 1188 Coils Coil 120 140 - -
Amo13g5692 1188 CDD GST_N_Tau 420 493 - -
Amo13g5692 1188 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 784 891 IPR045073 -
Amo13g5692 1188 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 418 519 IPR045073 -
Amo13g5692 1188 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 6 218 IPR045073 -
Amo13g5692 1188 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 570 784 IPR045073 -
Amo13g5692 1188 CDD GST_N_Tau 222 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g5692 Amo-Chr13 158842386 158863525 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g5692 785 959 Glutathione S-transferase Gene Family AT2G29420 40.000 1.05e-44 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g5692 K00799 - twl:119991530 367.081