Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g5674 ATGACTGTATTGCTTTGTGGAAATCACTTGAGTAAATGTCTTAATTTGAAGAACCTCCAGGCCAAGCATATGCGGGGGAACAATTATAACTGCATTCCTATAACACCCAGATCGAGATTAGAGAGGCTTCTGAGGGAGAGAGAGCTAAGAAAGTCAAACAAGTATTTTGAGGAGACAAGAGATGGCAACAAAGAAGCGGAACAAGTTTATAGTGACTCGTTAACAGAGAGCGACAGTTTTAATTCTCTCAATGAGGAAGACATTTCTGAAGCACTTGCTGTTGCAAAAGTATTTCCAGATAGAAGTCAAAGGCCGGAGGAGCGGCCACGCAAACAACGGTTGTTGGTGGTAGCTAATAGGTTGCCTGTCTCAGCTGTTAGGGAGGGTGAGGACTCATTCCACCTTGAGATCAGTGTTGGCGGCCTAGTCAGTGCACTTTTAGGCAAGAAAAAGTTTGTCATCTCTGCGTTAATTGTTTTATTGTGGTTAATTAATTCTTCTATTATGTATTTACTTCCTACAGCTTTTATTGCCTTTGTTGATGATCTCATACAGAGATGCATTCCAGTTTTTCTTGATGAGCAGATTGTGAATCAATACTATAACGGTTACTGCAACAACATCTTATGGCCTCTTTTTCATTATCTTGGGCTTCCACAAGAAGACAGACTTGCTACCACTCGCAGCTTCCAATCTCAATTTGATGCATATAAGAAGGCAAACCAGATGTTTGCTGATGTAGTAAATAGGTACTATAAGGAAGGAGATGTTGTTTGGTGCCATGATTACCATCTAATGTTCCTTCCAAAATGTTTAAAAGAATACAATGACAAAATGAAAGTTGGCTGGTTTCTTCATACTCCCTTTCCTTCCTCGGAAATTCATAGGACTCTGCCATCAAGAACAGAGCTATTGAGATCTGTACTTGCTGCTGACTTGGTGGGATTCCATACTTATGATTATGCCAGACATTTTGTAAGTGCTTGTACTCGCATTCTTGGGCTTGAAGGGACACCTGAAGGAGTAGAAGATCAAGGGAAGCTAACTCGTGTGGCTGCGTTTCCTATTGGGATTGATTCTGATCGGTTTATTCGAGCCCTTGAACTCCCTGAAGTCCAGGAGCACATGAAAGAACTGAAAGAAAGATTTGCAGGCAGAAAGGTAATGTTGGGCGTTGATCGTCTTGATATGATAAAAGGAATTCCGCAGAAGATATTGGCATTTGAAAAGTTCCTTGAGGAGAACCCACGCTGGCGTGATAAAGTTGTCTTGTTGCAAATTGCTGTACCAACTAGGACAAATGTTCCTGATTATCAAAAGCTTACAAGTCAGGTGCATGAGATTGTTGGCCGCATCAATGGAAGATTTGGAACCCTTACGGCTGTTCCAATACACCATCTGGATCGATCACTTGACTTCTATGCATTATGTGCACTTTATGCTGTTACTGCACTTGTTACATCTCTAAGGGATGGAATGAATCTTGTCAGCTATGAATTCGTTGCATGTCAAGCTTCCAAGAAAGGGGTTCTCATTTTAAGTGAGTTTGCAGGTGCTGCACAGTCTCTTGGTGCTGGTGCTATCTTGGTAAATCCATGGAATGTCACAGAGGTTGCTGCTTCTATTGGTTATGCACTGGATATGCCAGCCGATGAAAGAGAAAAACGGCATCTAGTTAACTTCAAGCACGTGACAACTCACACTTCACAAGAATGGGCAGCAACTTTTGTGAGTGAACTGAATGATACGATTGTCGAAGCGCAGCTTAGGACAAGACAAGTTCCACCATTACTTCCCAAGGAAGTGGCAGTTGATTGTTACTCAAAATCTAATAACCGATTAATTATACTGGGTTTCAATGCCACTTTGACAGAACCAGTGGATGCCCTTGGAAGGGGTGGTCAAATTAGAGAAATGGAACTTAAATTGCACCCAAATATAAAGAAGCCTTTAAAGAAGTTGTCTGATGATCCAAAGACAACAATTGTTGTTCTGAGTGGGAGTGATCGAACTGTCCTGGACAAAAATTTCAGGGAATACAATATGTGGTTAGCAGCAGAAAATGGGATGTTTCTACGGCATACTTCAGGTGAATGGATGACAACCATGCCTGAAAATTTACATATGGATTGGGTTGATAGCGTAAAGCATGTTTTTGAGTATTTTACCGAAAGAACTCCGCGGTCTCATTTTGAGCTTCGTGAGACTTCAGTTGTATGGAATTACAAGTATGCAGATATTGAGTTTGGAAGGCTTCAAGCAAGAGATCTGCTTCAGCATCTTTGGACAGGACCGATATCCAATGCATCTCTTGACGTTGTCCAAGGTGGTCGATCTGTTGAGGTCAGGGCAATTGGTGTCTCAAAGGGAGCAGCTATTGATCGCATCTTAGGAGAGATCGTTCATGACAAAGGAATGAAGGCTCCAATTGATTATGTCTTATGCATCGGGCACTTTCTAGCAAAGGATGAAGATGTCTATAAATTTTTTGAACCTGAGCTTCCTTGTGAATCATCACCATTAGCACGAGCTATGCCTTCCAATTCTTTAAGGTCATCACCTCTGCTAAAATTTCCAGTCAGCAAAAATGGGTCCAAAGCAGCTCGCTATAAGAAGCAACGTTCAATGTCAACCATAGAAAAGTTAGAAATCGATCATGCAAGGGGCGATCCATGGATACCAACTTATCATGATAGAACATCACTACATGAGGGCTCTTCAGTGCTCGATCTTCAAGGCGATAATTACTTCTCTTGTGCTGTTGCACGCAAGAGATCAAGTGCACGCTACTTACTCAAAACCTCAGATGATGTTGTCAATCTCTTAAGTAACATGGCAGATCATTCATCAACACGATCAACTTAA 2865 0.4157 MTVLLCGNHLSKCLNLKNLQAKHMRGNNYNCIPITPRSRLERLLRERELRKSNKYFEETRDGNKEAEQVYSDSLTESDSFNSLNEEDISEALAVAKVFPDRSQRPEERPRKQRLLVVANRLPVSAVREGEDSFHLEISVGGLVSALLGKKKFVISALIVLLWLINSSIMYLLPTAFIAFVDDLIQRCIPVFLDEQIVNQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFDAYKKANQMFADVVNRYYKEGDVVWCHDYHLMFLPKCLKEYNDKMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGKLTRVAAFPIGIDSDRFIRALELPEVQEHMKELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPRWRDKVVLLQIAVPTRTNVPDYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFYALCALYAVTALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSLGAGAILVNPWNVTEVAASIGYALDMPADEREKRHLVNFKHVTTHTSQEWAATFVSELNDTIVEAQLRTRQVPPLLPKEVAVDCYSKSNNRLIILGFNATLTEPVDALGRGGQIREMELKLHPNIKKPLKKLSDDPKTTIVVLSGSDRTVLDKNFREYNMWLAAENGMFLRHTSGEWMTTMPENLHMDWVDSVKHVFEYFTERTPRSHFELRETSVVWNYKYADIEFGRLQARDLLQHLWTGPISNASLDVVQGGRSVEVRAIGVSKGAAIDRILGEIVHDKGMKAPIDYVLCIGHFLAKDEDVYKFFEPELPCESSPLARAMPSNSLRSSPLLKFPVSKNGSKAARYKKQRSMSTIEKLEIDHARGDPWIPTYHDRTSLHEGSSVLDLQGDNYFSCAVARKRSSARYLLKTSDDVVNLLSNMADHSSTRST* 955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g5674 954 SUPERFAMILY HAD-like 613 801 IPR036412 -
Amo13g5674 954 Pfam Glycosyltransferase family 20 113 581 IPR001830 GO:0003824|GO:0005992
Amo13g5674 954 CDD GT20_TPS 113 581 IPR001830 GO:0003824|GO:0005992
Amo13g5674 954 Gene3D Glycogen Phosphorylase B; 365 565 - -
Amo13g5674 954 Gene3D - 639 799 IPR023214 -
Amo13g5674 954 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 62 946 IPR001830 GO:0003824|GO:0005992
Amo13g5674 954 TIGRFAM trehalose_OtsA: alpha,alpha-trehalose-phosphate synthase (UDP-forming) 113 581 IPR012766 GO:0003825|GO:0005992
Amo13g5674 954 Gene3D - 705 785 - -
Amo13g5674 954 MobiDBLite consensus disorder prediction 56 78 - -
Amo13g5674 954 Pfam Trehalose-phosphatase 638 834 IPR003337 GO:0003824|GO:0005992
Amo13g5674 954 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 112 584 - -
Amo13g5674 954 PANTHER BNAA02G18920D PROTEIN 62 946 - -
Amo13g5674 954 CDD HAD_TPP 614 833 - -
Amo13g5674 954 Gene3D Glycogen Phosphorylase B; 105 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g5674 Amo-Chr13 158651083 158657906 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g5674 24 951 Trehalose Biosynthesis Gene Families AT1G78580 72.013 0.0 1329
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g5674 K16055 - gmx:100816642 1490.71