Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g5632 ATGGGCCTTCTAGAAGAGCAAGCCCAGTCGCACTTCGCCGTAGCTTGTCACGTGTCGTCGGCGTCACCCGACTCACCCCCTCCTTGTTACTTCGCATGCCGGGCTGACCAGAAGCTCCGCGCCTATCAGGCTCCTCTTCTACAGTCTGCTACGCGCTTCCATTTTCTCGGTGTGTTGATATTCAGTATTTCTCTTCAATCTGCTAAGCCTGTCACCGGAACCGGAGCCCCTTTTCTCTCAGCGCGTCGCTGTCTTCCTCCTCTGTCCGCAACGCCACCATCGATCATCACCCCCAGCGTCTCCGTCAGAACCACTGAACCTCCACCGTCATCTTCTTCTTCTTCTTCTTCTTCTTCCTTCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCACCTCACCGAACAACCACCGCGAAAACCCTTTCTCTTCCCCTGTCTCCTGCTTTCTCTGTCTCACCGCCGGCTACCATCCAACTCCGCCACGACTGTCTTCTTCCCCTCCTCACAACCTCGCACTGTGGCTCTCTAGCTCGCCCCTGCCTCCCTCATTCTCAGTCGCAGAATCAGAACAGAGCCACTCTAGTTCCAGTGAGTTCAGACGCAGCAGCGGCTGGACACTGCCACTGCATCCCTCTCCTGAGTTCTTGCTCTGTTCTTCGACTCAGTACAAGATTAATGAAATTAGTCCTATGTAATCCAACTATGTCAACTTTGTATGCTTATTTAGTTTCAGAAGATATTTTAAAATTTATAAGCGTAGAGATGAAACATGTGGCGGAGGCTGCACCGGAGGAAAACTGCTCTGCCAAGCCAGCCTCCAAGGGGGAGGGTCTCCGCCAGTACTACTCTCTCCACATCCATGAGCTACAGCTCTTTCTCCGCCAGAAAACGCACAATCTCAACCGTCTCGAGGCTCAGCGCAATGAGCTCAATTTTAGAGTGAGGATGCTCAGGGAGGAGTTGCAGTTTCTCCAGGAGCCTGGATCGTATGTAGGGGAAGTTGTGAAAGTTATGGGAAAGAACAAAGTCTTAGTCAAGGTCCGGTCTCACTCCTCTGCTTACTGTTTATTCTACTCTCTGTGGCATAAGTATCATTTGAACTTGCACTCTAAATCATTGATGGACATATTCTTCTTTGAAATTTTTGTTCAAGTAGCTCTTCGTAATGATAGTTATGTCCTTCATTTAATTCTACCGAGCAAAGTTGATCCATTGGTCAATCTGATGAAAGTTGAGAAAGTTCCGGATTCTACTTATGACATGATTGGTGGCTTAGACCAGCAAATCAAGGAGATTAAAGAGGTCATTGAGCTACCAATTAAACATCCCGAACTGTTTGAAAGTCTTGGAATAGCTCAACCTAAGGGTGTTCTACTCTATGGGCCACCTGGTACTGGAAAAACGTTGTTGGCTAGGGCAATGGCTCATCATACTGACTGTACCTTCATCAGGGTATCTGGGCCTGTATTAGTTCAGAAATACATTGGAGAAGGCTCCAGAATGGTCAGGGAACTTTTTGTCATGGCCAGCATGCTCCATCAATTGATCTTCATGGACGAAATTGACAGTATTGGATCTGCTCGAATGGAATCTGGAAGTGGCAATGGTGATAGTGAGGTGCAGCGCACTATGCTGGAACTTCTCAACCAGCTAGATGGATTTGAAGCTTCAAATAAAATCAAGGTTATACAGTTTGTTTATGTTGGAGCTATACTGCTATTATGCATTCAGGAGAACTTTTTAAAACTAGCCTGGCTAGAAATAGAAAAAACAAGTTTTGATGGCACAAACCGGATTGATATCCTGGATCAAGCCCTCCTTAGACCTGGACGAATTGACAGGAAGATTGAATTTCCAAACCCAAATGAGGAGGTATGCATAATCTCGGCAGATATTTTGAAAATTCATTCAAGAAGAATGAACTTAATGCGTGGCATTGATTTGAAGAAGATTGCTGAGAAGATGAATGGAGCATCTGGTGCAGAGCTTAAGGCCGTGTGTACAGAAGCTGGAATGTTTGCTTTGAGGGAGAGGAGAGTACATGTGACACAGGAGGACTTTGAGATGGCTGTGGCCAAGGTTATGAAAAAGGAAACAGAGAAGAACATGTCATTGCGGAAGTTGTGGAAGTGA 2136 0.4625 MGLLEEQAQSHFAVACHVSSASPDSPPPCYFACRADQKLRAYQAPLLQSATRFHFLGVLIFSISLQSAKPVTGTGAPFLSARRCLPPLSATPPSIITPSVSVRTTEPPPSSSSSSSSSSFFLLLLLLLLLLPPHRTTTAKTLSLPLSPAFSVSPPATIQLRHDCLLPLLTTSHCGSLARPCLPHSQSQNQNRATLVPVSSDAAAAGHCHCIPLLSSCSVLRLSTRLMKLVLCNPTMSTLYAYLVSEDILKFISVEMKHVAEAAPEENCSAKPASKGEGLRQYYSLHIHELQLFLRQKTHNLNRLEAQRNELNFRVRMLREELQFLQEPGSYVGEVVKVMGKNKVLVKVRSHSSAYCLFYSLWHKYHLNLHSKSLMDIFFFEIFVQVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAMAHHTDCTFIRVSGPVLVQKYIGEGSRMVRELFVMASMLHQLIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVIQFVYVGAILLLCIQENFLKLAWLEIEKTSFDGTNRIDILDQALLRPGRIDRKIEFPNPNEEVCIISADILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRVHVTQEDFEMAVAKVMKKETEKNMSLRKLWK* 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g5632 711 PANTHER BNAA02G04630D PROTEIN 273 564 IPR035261 GO:0036402
Amo13g5632 711 MobiDBLite consensus disorder prediction 96 117 - -
Amo13g5632 711 CDD AAA 424 620 - -
Amo13g5632 711 PANTHER 26S PROTEASOME REGULATORY SUBUNIT 597 708 - -
Amo13g5632 711 PANTHER 26S PROTEASOME REGULATORY SUBUNIT 273 564 - -
Amo13g5632 711 PANTHER BNAA02G04630D PROTEIN 597 708 IPR035261 GO:0036402
Amo13g5632 711 Gene3D - 411 621 IPR027417 -
Amo13g5632 711 Gene3D - 294 410 IPR012340 -
Amo13g5632 711 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 411 694 IPR027417 -
Amo13g5632 711 Coils Coil 287 321 - -
Amo13g5632 711 Pfam ATPase family associated with various cellular activities (AAA) 458 620 IPR003959 GO:0005524|GO:0016887
Amo13g5632 711 SMART AAA_5 454 623 IPR003593 -
Amo13g5632 711 Pfam AAA+ lid domain 647 689 IPR041569 -
Amo13g5632 711 Gene3D - 631 706 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g5632 Amo-Chr13 158165507 158171039 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g5632 401 678 Calmodulin-binding Proteins AT3G56690 34.409 2.03e-39 154