Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g5627 ATGTTCGGAGAAACAGATCCGATGGACAAAGATAAAGAGATGGAGACGGTGGCCACTGCTAAAGTCCGACGCATGGACTCTTTCATCAACTTGGAAGCTGGACGTGTTACCATGAGTGAAACACATGGCTCTAAGGTTAGCTGGAAGACAACGTTAAGTTTGGCATTTCAAAGCGTAGGGATTGTTTATGGTGATATCGGCACATCTCCGCTTTATGTGTATTCGAGCATTTTTACCAGTGGAATAAAAAACAACGATGATATTCTTGGCGTCTTATCCCTCATCATCTATACCATTCTGCTCATACCTTTTCTTAAGTATGTCTTTATTGTACTATGGGCGAACGACAACGGCAATGGTGGAGCATTTGCATTGTATTCGCTGATATGCAGACACGTAGACGTGAGTTTGATTCCAAATCAACAACCAGAAGACAGAAAACTTTCTAACTACAAGCTGGAACTACCGTCTAGTCAGCTCAAACAATCCCAAACACTGAAGCAGATGCTTGAGAACAGTCAGTTTGCTCGTTTTCTTCTTTTGCTTGCAACCATTCTGGGAACTTCCATGGTCATAGGAGACGGCTTTCTTACTCCCTCAATGTCAGTCCTTTCTGCCGTAAGTGGGATCAGTAAATCACTCGGTCAAGATGCTACTGTGGGAATCGCTATAGGAATCTTAATTATTTTATTTTCTTTGCAAAGATTCGGTACAGATAAAATGGGATTCTCATTTGTACCAATTATTTTAGTGTGGTTTTTACTCATAGCGGGAATTGGTATCTATAATTTGTTCAAATATGATATCAGAGTGTTGCGTGCTTTCAATCCAAAATATATAGTTGATTACTTCAAACGCAACGGTAAGCAAGGATGGCTATCACTTGGTGGAGTCTTTCTATGCATAACAGGATCTGAAGCCATGTTTGCAGACTTGGGTCACTTTAATGTACGAGCAATTCAAATCAGCTTCACTTTGATTACATGTCCTGCAATATTGTGTGCATATACTGGGCAAGCTGCATTTCTTCGAAAGTTTCCTGAAAAAGTGGGTAATACTTTCTATGAAAGTCTACCAAATCCCATATACTGGCCAACATTTGTGGTGGCTGTTGGTGCTGCTATCATAGCAAGCCAAGCAATGATTTCAGGAGCATTTTCCATCATATCGCAGGCCCTGAGTCTAGGTTGTTTCCCACGAGTTAAGGTTGTGCATACTTCCACTAAGCACGAGGGTCAGGTGTATATTCCTGAGATCAACTACATGTTCATGATTGGAAGCATTATTATGTGTGTTGCCTTCAAAACCACAGAAAAGATAAGTCAAGCATACGGGATTGCAGTTATTGGGGATATGCTTATCACAACGTGGCTGGTTTCATTAATAATGGTAGTTATATGGAAGAAGAGCATATGGCAAGCTACTATCTTCTTATTGGTATTCGGCTGCATAGAGGCTATTTATTTCTCATCTCAGATAACAAAGTTCATGGAGGGAGGCTATATTCCAATTGTGTCTTCTTTGTTTTTGACGATGATCATGGGAATCTGGCATTACGTGCATAAAGAGAGGTACATGTTCGAGCTTAGAAATAAAGTTCGCAGTGAATACATAGGAGAATTGGCCATGGATAGGGACATAAGAAGAGTTCCCGGGGTAGGGCTGCTCTATTCTGAGCTTGTGCAGGGGATTCCTCCGATATTCCCCCATCTCATAGCCTGTATGTCATCCATCCATTCAGTCATTGTCTTTGTTTCCATCAAGGTCATCCCTATCAGCCGAGTTTCTTTAGAGGAGAGGTTTCTATTTTGCCATTTGGAGCCCAGAGAATACCGAATGTTCCGTTGCGTGGTTAGATGCGGTTATAAAGATAAACTCGAGGATGCTCTTGTATTTGAATCACAGTTAATACAAAATCTCAAAGCCTTCATTCACCTAGATGAACCTGAGGTCAACTTTATCGACATGGCAATGCAAAGAGGTGTGATGTATATGCTTGGCGAAGCAGAGGTGGTGGCTCTACCAAATTCATCGTTCCTCAATAAGATAGTTGTCAACTATGCTTATACTTTCTTAAGAAAGAACTTCCGCCAAGGAAACCAATTGATGGCCATCCCGCGTAAGAGACTTCTCAAGATTGGAATGACATATGAAATATAA 2160 0.4106 MFGETDPMDKDKEMETVATAKVRRMDSFINLEAGRVTMSETHGSKVSWKTTLSLAFQSVGIVYGDIGTSPLYVYSSIFTSGIKNNDDILGVLSLIIYTILLIPFLKYVFIVLWANDNGNGGAFALYSLICRHVDVSLIPNQQPEDRKLSNYKLELPSSQLKQSQTLKQMLENSQFARFLLLLATILGTSMVIGDGFLTPSMSVLSAVSGISKSLGQDATVGIAIGILIILFSLQRFGTDKMGFSFVPIILVWFLLIAGIGIYNLFKYDIRVLRAFNPKYIVDYFKRNGKQGWLSLGGVFLCITGSEAMFADLGHFNVRAIQISFTLITCPAILCAYTGQAAFLRKFPEKVGNTFYESLPNPIYWPTFVVAVGAAIIASQAMISGAFSIISQALSLGCFPRVKVVHTSTKHEGQVYIPEINYMFMIGSIIMCVAFKTTEKISQAYGIAVIGDMLITTWLVSLIMVVIWKKSIWQATIFLLVFGCIEAIYFSSQITKFMEGGYIPIVSSLFLTMIMGIWHYVHKERYMFELRNKVRSEYIGELAMDRDIRRVPGVGLLYSELVQGIPPIFPHLIACMSSIHSVIVFVSIKVIPISRVSLEERFLFCHLEPREYRMFRCVVRCGYKDKLEDALVFESQLIQNLKAFIHLDEPEVNFIDMAMQRGVMYMLGEAEVVALPNSSFLNKIVVNYAYTFLRKNFRQGNQLMAIPRKRLLKIGMTYEI* 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g5627 719 Pfam K+ potassium transporter 55 624 IPR003855 GO:0015079|GO:0016020|GO:0071805
Amo13g5627 719 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 16 646 IPR003855 GO:0015079|GO:0016020|GO:0071805
Amo13g5627 719 PANTHER POTASSIUM TRANSPORTER 5 648 718 - -
Amo13g5627 719 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 648 718 IPR003855 GO:0015079|GO:0016020|GO:0071805
Amo13g5627 719 TIGRFAM kup: potassium uptake protein 54 719 IPR003855 GO:0015079|GO:0016020|GO:0071805
Amo13g5627 719 PANTHER POTASSIUM TRANSPORTER 5 16 646 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g5627 Amo-Chr13 158144721 158148198 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g5627 1 719 Inorganic Solute Cotransporters AT4G13420 54.384 0.0 868
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g5627 K03549 - gmx:100814313 965.681