Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g5625 ATGGGAAGGTCTCCTTGCTGTAGCCATGAGCATGTGAGGAAGGGTGCTTGGTCTCTTGAAGAAGATGAGAAGCTCAAAGCATACATTCACACTTATGGCCCTGGAAAGAGTTGCAGACTGAGGTGGTTTAACTACCTCAGACCTGGCATTAAGCGAGGCCGATTGAGCAGACCATTCTAA 180 0.4833 MGRSPCCSHEHVRKGAWSLEEDEKLKAYIHTYGPGKSCRLRWFNYLRPGIKRGRLSRPF* 60
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g5625 59 Gene3D - 35 51 - -
Amo13g5625 59 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 50 IPR017930 -
Amo13g5625 59 Gene3D - 11 34 - -
Amo13g5625 59 PANTHER OS09G0431300 PROTEIN 1 56 - -
Amo13g5625 59 CDD SANT 16 46 IPR001005 -
Amo13g5625 59 SUPERFAMILY Homeodomain-like 8 55 IPR009057 -
Amo13g5625 59 PANTHER OS09G0431300 PROTEIN 1 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g5625 Amo-Chr13 158103878 158104057 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g5625 1 56 MYB Transcription Factor Family AT5G60890 52.113 2.40e-21 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g5625 K09422 - gmx:100818639 91.6633