Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g5623 ATGGGAAAAGACTCAAAGCCAAAGGAGTCTGGAAAGGGAAAGGGGAAACAAGCAGCAAGTGGAAGTGATGAGAATGCTTCTAAGGGCAAAGGAAAAGGTGCCAAAAGTGCAGATGGGCTTGGTACCTGCACCTATGTCAAAGCAAGGCACATCCTGTGTGAGAAGCAAGGTAAGATTAATGAGGCATACAAGAAGCTGCAGGATGGTTGGCTTGAAAATGGAGATAAGGTCCCACCAGCAGAGTTTGCAAAGGTAGCCCAGGAATATTCTGAATGTCCATCAGGAAAGAAGGGTGGAGACCTTGGATGGTTTCCACGAGGAAAGATGGCTGGACCGTTTCAGGATGTAGCATTTGCCACGCCTATTGGAGTCACCAGTGCTCCATTCAAGTCAACGCATGGCTACCATATTATATTATGTGAAGGAAGGAAGAACTGA 438 0.468 MGKDSKPKESGKGKGKQAASGSDENASKGKGKGAKSADGLGTCTYVKARHILCEKQGKINEAYKKLQDGWLENGDKVPPAEFAKVAQEYSECPSGKKGGDLGWFPRGKMAGPFQDVAFATPIGVTSAPFKSTHGYHIILCEGRKN* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g5623 145 Pfam PPIC-type PPIASE domain 45 139 - -
Amo13g5623 145 PANTHER - 1 145 IPR043323 GO:0003677|GO:0003755|GO:0006364
Amo13g5623 145 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 145 - -
Amo13g5623 145 Gene3D - 44 143 IPR046357 GO:0003755
Amo13g5623 145 SUPERFAMILY FKBP-like 42 141 - -
Amo13g5623 145 ProSiteProfiles PpiC-type peptidyl-prolyl cis-trans isomerase family profile. 43 142 IPR000297 GO:0003755
Amo13g5623 145 MobiDBLite consensus disorder prediction 1 39 - -
Amo13g5623 145 ProSitePatterns PpiC-type peptidyl-prolyl cis-trans isomerase signature. 82 102 IPR023058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g5623 Amo-Chr13 158093425 158095165 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g5623 46 138 Sulfurtransferasese or Rhodanese AT5G19370 29.032 1.09e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g5623 K09579 - qsu:111983187 262.307