Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g5610 ACAAAAACTAGTCCAAATGAGAATTTGGAGAGTAGAAAAGTTCCAACTTCGGTGGCCGTTGGCGTCGCGCATGGCCTTCTTCAAGCCGGACATCGCTATTTGGATGTCAGGACCATTGAAGAGTTCAGTGCAGGTCACACTCCAGGTGCCATTAACATCCCTTACCTTCACAAAATTGGAGAAGATATGACAAAAAACGCTGATTTCATTGAACAAGTCTCATCCCAATTCAGCAAACATGACAAAATCGTTGTTGGGTGTAAGAGCGGTAAGAGGTCTAAGATGGCTGCTACAGACTTATTAGATGCTGGATTTAGTGGAGTTAAAGATGTGGCTGGTGGTTATGATGATTGGACCCAAAATGGACTTCCAACACAAATATAA 384 0.4297 TKTSPNENLESRKVPTSVAVGVAHGLLQAGHRYLDVRTIEEFSAGHTPGAINIPYLHKIGEDMTKNADFIEQVSSQFSKHDKIVVGCKSGKRSKMAATDLLDAGFSGVKDVAGGYDDWTQNGLPTQI* 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g5610 127 CDD RHOD 34 118 - -
Amo13g5610 127 Gene3D - 2 126 IPR036873 -
Amo13g5610 127 Pfam Rhodanese-like domain 32 120 IPR001763 -
Amo13g5610 127 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 15, CHLOROPLASTIC 4 126 - -
Amo13g5610 127 SMART rhod_4 18 124 IPR001763 -
Amo13g5610 127 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 14 125 IPR036873 -
Amo13g5610 127 ProSiteProfiles Rhodanese domain profile. 27 127 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g5610 Amo-Chr13 157956770 157959826 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g5610 17 124 Sulfurtransferasese or Rhodanese AT5G66170 48.182 1.55e-31 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g5610 - - twl:120002437 177.563