Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g5602 ATGTCTTGTTCCAATCTCACTATGTTGGTGTCCTCAAAACCTTCTCTTTCTGATGCCTCCAACCTCTCTTTCCATTCTGTTCTCAACCCTTTTCAGCTCCCTTCACAAAATTCACCCTCATGCAGCCTCTCACGTTCTTCTGTCACCCCAGTACAGTGTGGTCTCAGAGAGCTCAGAACCCGCATTGAATCTGTCAARAACACACAGAAGATCACAGAAGCAATGAAGCTTGTTGCAGCCGCTAAAGTCAGAAGGRCTCAAGAAGCTGTTGTTAATGGAAGACCCTTCTCAGAGACTCTTGTTGAGGTCCTCTACAACATCAACGAGCAGCTCCAAACTGAGGACATTGATGTCCCTCTCACAAAAGTTAGGCCAGTGAAGAAGGTAGCACTGGTTGTGTGCACTGGTGATAGAGGTCTCTGGTGGTTTCAACAATAA 438 0.4612 MSCSNLTMLVSSKPSLSDASNLSFHSVLNPFQLPSQNSPSCSLSRSSVTPVQCGLRELRTRIESVKNTQKITEAMKLVAAAKVRRXQEAVVNGRPFSETLVEVLYNINEQLQTEDIDVPLTKVRPVKKVALVVCTGDRGLWWFQQ* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g5602 145 Pfam ATP synthase 55 140 IPR000131 GO:0015986|GO:0045261|GO:0046933
Amo13g5602 145 PANTHER ATP SYNTHASE GAMMA CHAIN 1, CHLOROPLASTIC 1 140 - -
Amo13g5602 145 PANTHER ATP SYNTHASE GAMMA CHAIN 1 140 IPR000131 GO:0015986|GO:0045261|GO:0046933
Amo13g5602 145 SUPERFAMILY ATP synthase (F1-ATPase), gamma subunit 54 140 IPR035968 GO:0015986|GO:0045261|GO:0046933
Amo13g5602 145 Gene3D ATP synthase, gamma subunit, helix hairpin domain 56 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g5602 Amo-Chr13 157888052 157888489 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g5602 30 140 Primary Pumps ATPases AT1G15700 65.487 1.20e-42 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g5602 K02115 - adu:107486787 266.929