Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g5597 ATGTCTGTTGAGGGGAACAACAGTTCATGTGATGGTTCATTAAACCAAAACTACCACCTGGCAACACAAGAAGTTGTATCTCAAGTTCCTTTGACCACATATGAAGAGTTTAAAGCAGCAGTTGTTGCAGCCAAGCAAGCATTTCCTTCATGGAAAAACACTCCTATTACCACTCGTCAACGAATAATATTCTTATTTCAGGATAAGCTTGCCATGAACATCACCATAGAACAAGGAAAAACATTAAAGGGTGCCAGAGGAGATGTGCTTCATGGTTTAGAGATGGTAGAGCATGCTTGTGGGATGGCAAATCTGCAAAAGGGAGAAATTGTTCCTAAAGCTTGTAATGGAATTGATACATACTGCATCAGAGATCCCCTTGGAGTTTGTGCTGGAATATGCCCGATTAACTTTCCTGCAATGACACCCTTGTGGATGTTCCCTATCGCGATAACATGCGGCAACACTTTTATTCTTAAGCCATGTGAAAATAATCCAGGAGCTTCAATGATACTTGCAGCATTAGCAATGGAAGCTGGTTTGCCCGATGGTGTTTTAAACGTGCAAAATATTGGCCAGGAATCTCTAAGGATATCAGAGATTGTTAATTACATATGCGATGATGAGGATATAAAAGCTGTGTCATTCAATGGTTCAATTACATCAAATGCAGGTGGCATAAATCATATAGTTGTTATGCCAGATGCTAGCATGGATGCTACTTTAGATGCCCTTGTTTCTGCTGGTTTCCGTGCAGCAGGAGAGAGGGAAGACGAATTGGGGCAGCGTGCCAAAGCACTTAGAGTGAATGTAGGAACAGATCCTGATGCAGACCTAGGTCCAGTTATTAGCAGAGAGGCAAAAGATAGGATATGTGGACTAGTTCAGAATGCTGTTGAAAATGGTGCAAGACTCCTACTTGATGGGAGGCACATTGTGGTATTAAACTTTTCCTTTGGAAGAAATGAAGTTCAGACCTTACCTGATAGGTACCCGGATATGAGAATGGAAATTTTGTTGGCCCTACTAACTTGTGTGATGTCACAACCAACATGGAGTGTTACAAGGAAGAAATTTATGGACCAGTTCTTCTTGGCATGCAGATATGGAAATGGAGCTTCTGTCTTCAACTCTGGTATGGTTGCTAGGAAGTTCCAACATGAGGTTGATGCTGTACTGTTTGGGATCGACGTGCCTGTACCTATTCCATTACAATTTTCCTTTAATGAGTCAAAAGCATCTTTTGCCGGCAATTTCAATTTTTGTGGTAGAGTTTGTGTCCTTTCTTCCCCCTTTTACGTTTTTTCACAAGGTTGCTAA 1320 0.4136 MSVEGNNSSCDGSLNQNYHLATQEVVSQVPLTTYEEFKAAVVAAKQAFPSWKNTPITTRQRIIFLFQDKLAMNITIEQGKTLKGARGDVLHGLEMVEHACGMANLQKGEIVPKACNGIDTYCIRDPLGVCAGICPINFPAMTPLWMFPIAITCGNTFILKPCENNPGASMILAALAMEAGLPDGVLNVQNIGQESLRISEIVNYICDDEDIKAVSFNGSITSNAGGINHIVVMPDASMDATLDALVSAGFRAAGEREDELGQRAKALRVNVGTDPDADLGPVISREAKDRICGLVQNAVENGARLLLDGRHIVVLNFSFGRNEVQTLPDRYPDMRMEILLALLTCVMSQPTWSVTRKKFMDQFFLACRYGNGASVFNSGMVARKFQHEVDAVLFGIDVPVPIPLQFSFNESKASFAGNFNFCGRVCVLSSPFYVFSQGC* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g5597 439 SUPERFAMILY ALDH-like 11 418 IPR016161 GO:0016491
Amo13g5597 439 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 404 419 IPR016162 GO:0016491
Amo13g5597 439 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 261 403 IPR016163 GO:0016620
Amo13g5597 439 Pfam Aldehyde dehydrogenase family 17 256 IPR015590 GO:0016491
Amo13g5597 439 Pfam Aldehyde dehydrogenase family 259 310 IPR015590 GO:0016491
Amo13g5597 439 PANTHER METHYLMALONATE-SEMIALDEHYDE DEHYDROGENASE [ACYLATING], MITOCHONDRIAL-LIKE 21 427 - -
Amo13g5597 439 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 6 260 IPR016162 GO:0016491
Amo13g5597 439 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 21 427 IPR010061 GO:0004491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g5597 Amo-Chr13 157840569 157846136 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g5597 21 435 Aldehyde Dehydrogenase Gene Family AT2G14170 54.681 1.60e-154 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g5597 K00140 - jre:108986827 486.493